1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CAATCATTAAAAGATGGCAGATGGTGAGGATATACAACCTCTTGTTTGTGATAATGGAACTGGAATGGTCAAGgtatgtatatggattcatttgtgtgttgctttgtttgttgatcttataggttttggttttggagaaaacttatatgcaattccataaatgcttttagtgt...
species | Glycine max |
transcript | GLYMA02G29160.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GTGAGGATATACAACCTCTTGTTTGTGATAATGGAACTGGAATGGTCAAG GCTGGATTTGCTGGAGATGATGCTCCAAGGGCTGTGTTCCCTAGCATTGTGEST: gi|209718162|gb|BW657808.1|BW657808
genomic: GTGAGGATATACAACCTCTTGTTTGTGATAATGGAACTGGAATGGTCAAGgtatgtatat ... aattttgcagGCTGGATTTGCTGGAGATGATGCTCCAAGGGCTGTGTTCCCTAGCATTGTG
EST: GTGAGGATATACAACCTCTTGTTTGTGATAATGGAACTGGAATGGTCAAG GCTGGATTTGCTGGAGATGATGCTCCAAGGGCTGTGTTCCCTAGCATTGTG
genomic: GTGAGGATATACAACCTCTTGTTTGTGATAATGGAACTGGAATGGTCAAGgtatgtatat ... aattttgcagGCTGGATTTGCTGGAGATGATGCTCCAAGGGCTGTGTTCCCTAGCATTGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAATCATTAAAAGATGGCAGATGGTGAGGATATACAACCTCTTGTTTGTGATAATGGAACTGGAATGGTCAAGgtatgtatatggattcatttgtgtgttgctttgtttgttgatcttataggttttggttttggagaaaacttatatgcaattccataaatgcttttagtgt
- - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggagaaaa