1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GATCTGATCGTCCATTAGCTGAAAGACTTTTAGATCTGAAAGATGCTTGTTGGAGATTTTTAAGGCCACATACTATACGTGGTACAGCACTAGGTTCATTgtgagtaacttcataacttgctaggaactgtttcttgcaccttcatcccaagcatacttgtctgaagttcattttctctttgtatttacag
species | Glycine max |
transcript | GLYMA02G26820.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GGAGATTTTTTAAGGCCACATACTATACGTGGTACAGCACTAGGTTCATT TGCTTTGGTGGCAAGAGCATTGATEST: gi|4307276|gb|AI444024.1|AI444024
genomic: GGAGATTTTT-AAGGCCACATACTATACGTGGTACAGCACTAGGTTCATTgtgagtaact ... gtatttacagTGCTTTGGTGGCAAGAGCATTGAT
EST: TGGAGATTTTTAAGGCCACATACTATACGTGGTACAGCACTAGGTTCATT TTGCTT-GGTGGCA
genomic: TGGAGATTTTTAAGGCCACATACTATACGTGGTACAGCACTAGGTTCATTgtgagtaact ... gtatttacagT-GCTTTGGTGGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATCTGATCGTCCATTAGCTGAAAGACTTTTAGATCTGAAAGATGCTTGTTGGAGATTTTTAAGGCCACATACTATACGTGGTACAGCACTAGGTTCATTgtgagtaacttcataacttgctaggaactgtttcttgcaccttcatcccaagcatacttgtctgaagttcattttctctttgtatttacag
- - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT