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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTCCCCTTTCCCTTCTCAAGACTGCCCAAGGCCACCCCATGgtgagtcaaaccccctgtgctttatttttaccctctttttttttagggttaccttattgttattatatgtgtagaacttgtgttaatactgtttgatttgtaacag

Basic information

species Glycine max
transcript GLYMA02G17430.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7639290|gb|AW733616.1|AW733616
EST:     CTTCCCCTTTCCCTTCTCAAGACTGCCCAAGGCCACCCCATG                         CTGGTGGAACTGAAAAATGGGGAGACTTATAACGGGCACTTGGTTAATTGT
genomic: CTTCCCCTTTCCCTTCTCAAGACTGCCCAAGGCCACCCCATGgtgagtcaaa ... tttgtaacagCTGGTGGAACTGAAAAATGGGGAGACTTATAACGGGCACTTGGTTAATTGT
EST: gi|254324586|gb|GR834011.1|GR834011
EST:     CTTCCCCTTTCCCTTCTCAAGACTGCCCAAGGCCACCCCATG                         CTGGTGGAACTGAAAAATGGGGAGACTTATAACGGGCACTTGGTTAATTGT
genomic: CTTCCCCTTTCCCTTCTCAAGACTGCCCAAGGCCACCCCATGgtgagtcaaa ... tttgtaacagCTGGTGGAACTGAAAAATGGGGAGACTTATAACGGGCACTTGGTTAATTGT
EST: gi|193406386|gb|FK373035.1|FK373035
EST:     CTTCCCCTTTCCCTTCTCAAGACTGCCCAAGGCCACCCCATG                         CTGGTGGAACTGAAAAATGGGGAGACTTATAACGGGCACTTGGTTAATTGT
genomic: CTTCCCCTTTCCCTTCTCAAGACTGCCCAAGGCCACCCCATGgtgagtcaaa ... tttgtaacagCTGGTGGAACTGAAAAATGGGGAGACTTATAACGGGCACTTGGTTAATTGT
EST: gi|193581035|gb|FK535976.1|FK535976
EST:     CTTCCCCTTTCCCTTCTCAAGACTGCCCAAGGCCACCCCATG                         CTGGTGGAACTGAAAAATGGGGAGACTTATAA
genomic: CTTCCCCTTTCCCTTCTCAAGACTGCCCAAGGCCACCCCATGgtgagtcaaa ... tttgtaacagCTGGTGGAACTGAAAAATGGGGAGACTTATAA
EST: gi|298174084|gb|HO017420.1|HO017420
EST:     CTTCCCCTTTCCCTTCTCAAGACTGCCCAAGGCCACCCCATG                         CTGGTGGAACTGAAAAATGGGGAGACTTATAACGGGCACTTGGTTAATTGT
genomic: CTTCCCCTTTCCCTTCTCAAGACTGCCCAAGGCCACCCCATGgtgagtcaaa ... tttgtaacagCTGGTGGAACTGAAAAATGGGGAGACTTATAACGGGCACTTGGTTAATTGT