Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCCCGACTGGCCAGCAGACCTTGATGAGAGCCCTAATGAACTTGAGTGGTGGATGAAATCTGTTGACTCGATTAAAGCTTTTGGCAATGATTATTACAGGgtattggtgctttcccatggtccatctcagattattattctgatgtattatttcatcccctaacctaaatagagatttattgatttttctgagatatgaa...

Basic information

species Glycine max
transcript GLYMA02G15250.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151407281|gb|EV277096.1|EV277096
EST:     GGATGAAATCTGTTGACTCGATTAAAGCTTTTGGCAATGATTATTACAGG                         AAACAAGATTACAAAATGGCTCTAAG-AAGTATCGGA
genomic: GGATGAAATCTGTTGACTCGATTAAAGCTTTTGGCAATGATTATTACAGGgtattggtgc ... tttctgacagAAACAAGATTACAAAATGGCTCTAAGGAAGTATCGGA
EST: gi|7233363|gb|AW568710.1|AW568710
EST:     GGATGAAATCTGTTGACTCGATTAAAGCTTTTGGCAATGATTATTACAGG                         AAACAAGATTACAAAATGGCTCTAAGGAAGTATCGGAAGGCTTTACGCTAC
genomic: GGATGAAATCTGTTGACTCGATTAAAGCTTTTGGCAATGATTATTACAGGgtattggtgc ... tttctgacagAAACAAGATTACAAAATGGCTCTAAGGAAGTATCGGAAGGCTTTACGCTAC
EST: gi|57575694|gb|CX548669.1|CX548669
EST:     GGATGAAATCTGTTGACTCGATTAAAGCTTTTGGCAATGATTATTACAGG                         AAACAAGATTACAAAATGGCTCTAAGGAAGTATCGGAAGGCTTTACGCTAC
genomic: GGATGAAATCTGTTGACTCGATTAAAGCTTTTGGCAATGATTATTACAGGgtattggtgc ... tttctgacagAAACAAGATTACAAAATGGCTCTAAGGAAGTATCGGAAGGCTTTACGCTAC
EST: gi|11412607|gb|BF424618.1|BF424618
EST:     GGATGAAATCTGTTGACTCGATTAAAGCTTTTGGCAATGATTATTACAGG                         AAACAAGATTACAAAATGGCTCTAAGGAAGTATCGGAAGGCTNTACGCTAC
genomic: GGATGAAATCTGTTGACTCGATTAAAGCTTTTGGCAATGATTATTACAGGgtattggtgc ... tttctgacagAAACAAGATTACAAAATGGCTCTAAGGAAGTATCGGAAGGCTTTACGCTAC