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GTGGGGATTTGTGAGCTTCCATTTCATCCAATTAGCTCAGAAACAATTGGAGGAGTCGGTGGAACgtaagttataaacttgaaaacatttctttcctttccatagattattttctttcgtctcttctctctcttttatctaatgcatacattcctggctaattac...
species | Glycine max |
transcript | GLYMA02G08180.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CTTCCATTTCATCCAATTAGCTCAGAAACAATTGGAGGAGTCGGTGGAAC GTGTGTTATTCGTGGTTGTGTTCCCAAAAAGATTTTGGTCTATGGAGCATCEST: gi|298192859|gb|HO033293.1|HO033293
genomic: CTTCCATTTCATCCAATTAGCTCAGAAACAATTGGAGGAGTCGGTGGAACgtaagttata ... aatttcaaagGTGTGTTATTCGTGGTTGTGTTCCCAAAAAGATTTTGGTCTATGGAGCATC
EST: CTTCCATTTCATCCAATTAGCTCAGAAACAATTGGAGGAGTCGGTGGAAC GTGTGTTATTCGTGGTTGTGTTCCCAAAAAGATTTTGGTCTATGGGGCATCEST: gi|193628554|gb|FK577194.1|FK577194
genomic: CTTCCATTTCATCCAATTAGCTCAGAAACAATTGGAGGAGTCGGTGGAACgtaagttata ... aatttcaaagGTGTGTTATTCGTGGTTGTGTTCCCAAAAAGATTTTGGTCTATGGAGCATC
EST: CTTCCATTTCATCCAATTAGCTCAGAAACAATTGGAGGAGTCGGTGGAAC GTGTGTTATTCGTGGTTGTGTTCCCAAAAAGATTTTGGTCTATGGAGCATC
genomic: CTTCCATTTCATCCAATTAGCTCAGAAACAATTGGAGGAGTCGGTGGAACgtaagttata ... aatttcaaagGTGTGTTATTCGTGGTTGTGTTCCCAAAAAGATTTTGGTCTATGGAGCATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGGGGATTTGTGAGCTTCCATTTCATCCAATTAGCTCAGAAACAATTGGAGGAGTCGGTGGAACgtaagttataaacttgaaaacatttctttcctttccatagattattttctttcgtctcttctctctcttttatctaatgcatacattcctggctaattac
- - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cctttcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctctctc