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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAAATTGTTGAATTTAGTACGgtgaggtctttgctttgttgatagttgtagttgaatatgagttcatacttcattacaattatccataccttgttgattccatgattgtatgtattgtattaatag

Basic information

species Glycine max
transcript GLYMA02G08010.3
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193687517|gb|FK627440.1|FK627440
EST:     TAAAGAAAATTGTTGAA-TTAGTACG                         GTTGAAGGATTTTGGGTCTGCTACTGCCATCTTGCCCGTCCTGCTTCTTTA
genomic: TAAAGAAAATTGTTGAATTTAGTACGgtgaggtctt ... gtattaatagGTTGAAGGATTTTGGGTCTGCTACTGCCATCTTGCTCGTCCTGCTTCTTTA
EST: gi|298163689|gb|HO012422.1|HO012422
EST:     TAAAGAAAATTGTTGAATTTAGTACG                         GTTGAAGGATTTTGGGTCTGCTACTGCCATCTTGCTCGTCCTGCTTCTTTA
genomic: TAAAGAAAATTGTTGAATTTAGTACGgtgaggtctt ... gtattaatagGTTGAAGGATTTTGGGTCTGCTACTGCCATCTTGCTCGTCCTGCTTCTTTA
EST: gi|19452727|gb|BM954137.1|BM954137
EST:     AAGAAAATTGTTGAATTTAGTACG                         GTTGAAGGATTTTGGGTCTGCTACTGCCATCTTGCTCGTCCTGCTTCTTTA
genomic: AAGAAAATTGTTGAATTTAGTACGgtgaggtctt ... gtattaatagGTTGAAGGATTTTGGGTCTGCTACTGCCATCTTGCTCGTCCTGCTTCTTTA