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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGTGTTTTTGCAGGTACCATGGGTGGCTTCAGTTTCGATGCCGACTTCCAACTGCTACGCTTTCGACAATTCTAGTCGCATTGTTGATTTCgtatccttcaattcatttccacatgttatgcacttttatttcactattgtattttgatattcataatcgtaaattagtaattcattcattgatttaggtt...

Basic information

species Glycine max
transcript GLYMA02G05950.1
intron # 2
splice site 5'
intron type U12 (go to U12 genes for details)

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9204371|gb|BE330595.1|BE330595
EST:     CGACTTCCAACTGCTACGCTTTCGACAATTCTAGTCGCATTGATGATTTC                         AGTGGCTGGACTGGTTATCTTTTCGAGTATGATCAAAAG
genomic: CGACTTCCAACTGCTACGCTTTCGACAATTCTAGTCGCATTGTTGATTTCgtatccttca ... ggttaattagAGTGGCTGGACTGGTTATCTTTTCGAGTATGATCAAAAG
EST: gi|192329022|gb|FK021404.1|FK021404
EST:     CGACTTCCAACTGCTACGCTTTCGACAATTCTAGTCGCATTGTTGATTTC                         AGTGGCTGGACTGGTTATCTTTTCGAGTATGATCAAAAG
genomic: CGACTTCCAACTGCTACGCTTTCGACAATTCTAGTCGCATTGTTGATTTCgtatccttca ... ggttaattagAGTGGCTGGACTGGTTATCTTTTCGAGTATGATCAAAAG