1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
CTGCTGAGCGGATTTTGGAGAAGAGGAAGATGAACCAAACAATGCTAACTAATCACAGTACTTTGCTTGACTTGCTAGAAATTCCTCAACTCATGGACACgtatgttaaaaaatatagactatttaattacactcctggaatgtccatgtactaatgttattgcatattatgatgatcacttcctctgtgagaagcgttgtaaattcctatatttttgcag
species | Glycine max |
transcript | GLYMA02G04920.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AATCACAGTACTTTGCTTGACTTGCTAGAAATTCCTCAACTCATGGACAC ATGTGTACGGAATGGGAATTATGATGAAGCCCTAGATTTGGAAGCATTTGTEST: gi|193466896|gb|FK430315.1|FK430315
genomic: AATCACAGTACTTTGCTTGACTTGCTAGAAATTCCTCAACTCATGGACACgtatgttaaa ... atttttgcagATGTGTACGGAATGGGAATTATGATGAAGCCCTAGATTTGGAAGCATTTGT
EST: AATCACAGTACTTTGCTTGACTTGCTAGAAATTCCTCAACTCATGGACAC ATGTGTACGGAATGGGEST: gi|208184356|gb|GD984552.1|GD984552
genomic: AATCACAGTACTTTGCTTGACTTGCTAGAAATTCCTCAACTCATGGACACgtatgttaaa ... atttttgcagATGTGTACGGAATGGG
EST: AATCACAGTACTTTGCTTGACTTGCTAGAAATTCCTCAACTCATGGACAC ATGTGTACGGAATEST: gi|193671294|gb|FK613290.1|FK613290
genomic: AATCACAGTACTTTGCTTGACTTGCTAGAAATTCCTCAACTCATGGACACgtatgttaaa ... atttttgcagATGTGTACGGAAT
EST: AATCACAGTACTTTGCTTGACTTGCTAGAAATTCCTCAACTCATGGACAC ATGTGTACGGAATGGGAATTATGATGAAGCCCTAGATTTGGAAGCATTTGTEST: gi|209722418|gb|BW682794.1|BW682794
genomic: AATCACAGTACTTTGCTTGACTTGCTAGAAATTCCTCAACTCATGGACACgtatgttaaa ... atttttgcagATGTGTACGGAATGGGAATTATGATGAAGCCCTAGATTTGGAAGCATTTGT
EST: ATCACAGTAACTT-GCTTGACTTGCTAGAAATTCCTCAACTCATGGACAC ATGTGTACGGAATGGGAATTATGATGAAEST: gi|254327754|gb|GR834719.1|GR834719
genomic: ATCACAGTA-CTTTGCTTGACTTGCTAGAAATTCCTCAACTCATGGACACgtatgttaaa ... atttttgcagATGTGTACGGAATGGGAATTATGATGAA
EST: AATCACAGTACTTTGCTTGACTTGCTAGAAATTCCTCAACTCATGGACAC ATGTGTACGGAATGGGAATTATGATGAAGCCCTAGATTTGGAAGCATTTGTEST: gi|193626763|gb|FK574443.1|FK574443
genomic: AATCACAGTACTTTGCTTGACTTGCTAGAAATTCCTCAACTCATGGACACgtatgttaaa ... atttttgcagATGTGTACGGAATGGGAATTATGATGAAGCCCTAGATTTGGAAGCATTTGT
EST: AATCACAGTACTTTGCTTGACTTGCTAGAAATTCCTCAACTCATGGACAC ATGTGTACGGAATGGGAATTA
genomic: AATCACAGTACTTTGCTTGACTTGCTAGAAATTCCTCAACTCATGGACACgtatgttaaa ... atttttgcagATGTGTACGGAATGGGAATTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGCTGAGCGGATTTTGGAGAAGAGGAAGATGAACCAAACAATGCTAACTAATCACAGTACTTTGCTTGACTTGCTAGAAATTCCTCAACTCATGGACACgtatgttaaaaaatatagactatttaattacactcctggaatgtccatgtactaatgttattgcatattatgatgatcacttcctctgtgagaagcgttgtaaattcctatatttttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA