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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGATTGTTAGTGGGTTTCTCTCAAATGCCGTTCCTGCGTTCACCAAATGGGTCTGGTCACTCAAAGCACCCACCAAAACCGgtatgaaactttacaaagtagattgcattttctttttgtttcttttcaattttgaagtttttggttatgtggaattgaaatgtttcag

Basic information

species Glycine max
transcript GLYMA02G03810.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213595695|gb|DB962467.1|DB962467
EST:     TCCTGCGTTCACCAAATGGGTCTGGTCACTCAAAGCACCCACCAAAACCG                         CGATTGGTGCGAAGTCGATGATGAAGTTCGAGAGTGGGTACACTGTGGAAA
genomic: TCCTGCGTTCACCAAATGGGTCTGGTCACTCAAAGCACCCACCAAAACCGgtatgaaact ... aatgtttcagCGATTGGTGCGAAGTCGATGATGAAGTTCGAGAGTGGGTACACTGTGGAAA
EST: gi|151396366|gb|EV266243.1|EV266243
EST:     TCCTGCGTTCACCAAATGGGTCTGGTCACTCAAAGCACCCACCAAAACCG                         CGATTGGTGCGAAGTCGATGATGAAGTTCGAGAGTGGGTACACTGTGGAAA
genomic: TCCTGCGTTCACCAAATGGGTCTGGTCACTCAAAGCACCCACCAAAACCGgtatgaaact ... aatgtttcagCGATTGGTGCGAAGTCGATGATGAAGTTCGAGAGTGGGTACACTGTGGAAA