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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCGACGAAGCGATTCAACGGTGAAAGGTTCGAGCACCTTGCGTTTCTGAACTTGGCGCAGAATGTTGTGTGTTTAATCTGGTCGTTTATCAgtaagattctatcgctaattactctatctctatagcaattacagttttttttataggcttggtttaattcccatatagtgtgtctctgaaactaatcaga...

Basic information

species Glycine max
transcript GLYMA02G02330.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192298869|gb|FG987614.1|FG987614
EST:     GTTTCTGAACTTGGCGCAGAATGTTGTGTGTTTAATCTGGTCGTTTATCA                         TGATAAAGATGTGGGCTAGTGGAAATTCAGGTGGTGCTCCTTGGTGGAGTT
genomic: GTTTCTGAACTTGGCGCAGAATGTTGTGTGTTTAATCTGGTCGTTTATCAgtaagattct ... atgtggacagTGATAAAGATGTGGGCTAGTGGAAATTCTGGTGGTGCTCCTTGGTGGAGTT
EST: gi|209721388|gb|BW654584.1|BW654584
EST:     GTTTCTGAACTTGGCGCAGAATGTTGTGTGTTTAATCTGGTCGTTTATCA                         TGATAAAGATGTGGGCTAGTGGAAATTCTGGTGGTGCTCCTTGGTGGAGTT
genomic: GTTTCTGAACTTGGCGCAGAATGTTGTGTGTTTAATCTGGTCGTTTATCAgtaagattct ... atgtggacagTGATAAAGATGTGGGCTAGTGGAAATTCTGGTGGTGCTCCTTGGTGGAGTT
EST: gi|192304303|gb|FG996443.1|FG996443
EST:     GTTTCTGAACTTGGCGCAGAATGTTGTGTGTTTAATCTGGTCGTTTATCA                         TGATAAAGATGTGGGCTAGTGGAAATTCTGGTGGTGCTCCTTGGTGGAGTT
genomic: GTTTCTGAACTTGGCGCAGAATGTTGTGTGTTTAATCTGGTCGTTTATCAgtaagattct ... atgtggacagTGATAAAGATGTGGGCTAGTGGAAATTCTGGTGGTGCTCCTTGGTGGAGTT
EST: gi|213615395|gb|DB965495.1|DB965495
EST:     GTTTCTGAACTTGGCGCAGAATGTTGTGTGTTTAATCTGGTCGTTTATCA                         TGATAAAGATGTGGGCTAGTGGAAATTCTGGTGGTGCTCCTTGGTGGAGTT
genomic: GTTTCTGAACTTGGCGCAGAATGTTGTGTGTTTAATCTGGTCGTTTATCAgtaagattct ... atgtggacagTGATAAAGATGTGGGCTAGTGGAAATTCTGGTGGTGCTCCTTGGTGGAGTT
EST: gi|151411658|gb|EV281469.1|EV281469
EST:     GTTTCTGAACTTGGCGCAGAATGTTGTGTGTTTAATCTGGTCGTTTATCA                         TGATAAAGATGTGGGCTAGTGGAAATTCTGGTGGTGCTCCTTGGTGGAGTT
genomic: GTTTCTGAACTTGGCGCAGAATGTTGTGTGTTTAATCTGGTCGTTTATCAgtaagattct ... atgtggacagTGATAAAGATGTGGGCTAGTGGAAATTCTGGTGGTGCTCCTTGGTGGAGTT