1 5' 3' | 2 5' 3' |
GATTCGCATTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGATACAGATGGAGAAAGTACGGTCAAAAGGCCGTGAAAAACAGCCCCTTTCCCAGgtaacatatgctgtaataattctcccgaataaactccattaatcttaactcttagctcacctgcacctacctacttttgcttccttccctacttctctta...
species | Glycine max |
transcript | GLYMA02G01420.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CCCTTTCCCAG GAGCTACTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAGCGTGTGGAEST: gi|15286197|gb|BI470088.1|BI470088
genomic: CCCTTTCCCAGgtaacatatg ... tcacatgtagGAGCTACTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAGCGTGTGGA
EST: AGATGGAGAAAGTACGGTCAAAAGGCCGTGAAAAACAGCCCCTTTCCCAG GAGCTACTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAGCGTGTGGA
genomic: AGATGGAGAAAGTACGGTCAAAAGGCCGTGAAAAACAGCCCCTTTCCCAGgtaacatatg ... tcacatgtagGAGCTACTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAGCGTGTGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATTCGCATTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGATACAGATGGAGAAAGTACGGTCAAAAGGCCGTGAAAAACAGCCCCTTTCCCAGgtaacatatgctgtaataattctcccgaataaactccattaatcttaactcttagctcacctgcacctacctacttttgcttccttccctacttctctta
- - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttctccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccttccc