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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTCAGCACCACTGAGCGGTTAATAGCTTTTGCTCTGCTAGTTGAGGCTTATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAATgtaaacacttattattgtcgttttacttgttggaacttttttgtatggttatttgatttgtctaattctttgaagttagaaccggtttttgaaggctaga...

Basic information

species Glycine max
transcript GLYMA02G00750.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213590906|gb|DB973717.1|DB973717
EST:     ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAAT                         GCTTCCTGTAATGAAGGGTCAGAAAAAGTTGAGAGGGCATTTATTCTACAG
genomic: ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAATgtaaacactt ... ttggctacagGCTTCCTGTAATGAAGGGTCAGAAAAAGTTGAGAGGGCATTTATTCTACAG
EST: gi|22541847|gb|BU091690.1|BU091690
EST:     ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAAT                         GCTTCCTGTAATGAAAGGTCAGAAAAAGTTGAGAGGGCATTTATTCTACAG
genomic: ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAATgtaaacactt ... ttggctacagGCTTCCTGTAATGAAGGGTCAGAAAAAGTTGAGAGGGCATTTATTCTACAG
EST: gi|19347696|gb|BM892484.1|BM892484
EST:     ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAAT                         GCTTCCTGTAATGAAGGGTCAGAAAAAGTTGAGAGGGCATTTATTCTACAG
genomic: ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAATgtaaacactt ... ttggctacagGCTTCCTGTAATGAAGGGTCAGAAAAAGTTGAGAGGGCATTTATTCTACAG
EST: gi|6566941|gb|AW234572.1|AW234572
EST:     ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAAT                         GCTTCCTGTAATGAAGGGTCAGAAAAAGTTGAGAGGGCATTTATTCTACAG
genomic: ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAATgtaaacactt ... ttggctacagGCTTCCTGTAATGAAGGGTCAGAAAAAGTTGAGAGGGCATTTATTCTACAG
EST: gi|193410737|gb|FK375898.1|FK375898
EST:     ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAAT                         GCTTCCTGTAATGAAGGGTCAGAAAAAGTTGAGAGGGCATTTATTCTACAG
genomic: ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAATgtaaacactt ... ttggctacagGCTTCCTGTAATGAAGGGTCAGAAAAAGTTGAGAGGGCATTTATTCTACAG
EST: gi|254328397|gb|GR835362.1|GR835362
EST:     ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAAT                         GCTTCCTGTAATGAAGGGTCAGAAAAAGTTGAGAGGGCATTTATTCTACAG
genomic: ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAATgtaaacactt ... ttggctacagGCTTCCTGTAATGAAGGGTCAGAAAAAGTTGAGAGGGCATTTATTCTACAG
EST: gi|4291000|gb|AI437557.1|AI437557
EST:     ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAAT                         GCTTCCTGTAATGAAGGGTCAGAAAAAGTTGAGAGGGCATNTATTCTACAG
genomic: ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAATgtaaacactt ... ttggctacagGCTTCCTGTAATGAAGGGTCAGAAAAAGTTGAGAGGGCATTTATTCTACAG
EST: gi|208218769|gb|GE017081.1|GE017081
EST:     ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAAT                         GCTTCCTGTAATGAAGGGTCAGAAAAAGTTGAGAGGGCATTTATTCTACAG
genomic: ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAATgtaaacactt ... ttggctacagGCTTCCTGTAATGAAGGGTCAGAAAAAGTTGAGAGGGCATTTATTCTACAG
EST: gi|192301309|gb|FG989014.1|FG989014
EST:     ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAAT                         GCTTCCTGTAATGAAGGGTCAGAAAAAGTTGAGAGGGCATTTATTCTACAG
genomic: ATTCATCCCAGAAACCGGCTTCAAATCCCTTCATAAGCTTTATTGTAAATgtaaacactt ... ttggctacagGCTTCCTGTAATGAAGGGTCAGAAAAAGTTGAGAGGGCATTTATTCTACAG