1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
CAGATTTGGCAGAGCCATTGTGTCCAAAGAGAAAAATGCAAAGCACACGCGCCTTATTCTTTCAGATCCTCGTGATTGTTGCATTCCGCCAAAGAATAAGgttctttcttcatgtgtgacatgttgtattgtactttactttggtcactagtgtagcaaagtactaacatgttagtagttcaactgtgttgtgtaaactgtcag
species | Glycine max |
transcript | GLYMA01G42940.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GCCTTATTCTTTCAGATCCTCGTGATTGTTGCATTCCGCCAAAGAATAAG ATTGTGGGAGATGTCATCATGGTGGATCGAGGCAACTGCACGTTCACAAAAEST: gi|193495316|gb|FK459338.1|FK459338
genomic: GCCTTATTCTTTCAGATCCTCGTGATTGTTGCATTCCGCCAAAGAATAAGgttctttctt ... aaactgtcagATTGTGGGAGATGTCATCATGGTGGATCGAGGCAACTGCACGTTCACAAAA
EST: GCCTTATTCTTTCAGATCCTCGTGATTGTTGCATTCCGCCAAAGAATAAG ATTGTGGGAGATGTCATCATGGTGGATCGAGGCAACTGCACGTTCACAAAAEST: gi|209729790|gb|BW658595.1|BW658595
genomic: GCCTTATTCTTTCAGATCCTCGTGATTGTTGCATTCCGCCAAAGAATAAGgttctttctt ... aaactgtcagATTGTGGGAGATGTCATCATGGTGGATCGAGGCAACTGCACGTTCACAAAA
EST: GCCTTATTCTTTCAGATCCTCGTGATTGTTGCATTCCGCCAAAGAATAAG ATTGTGGGAGATGTCATCATGGTGGATCGAGGCAACTGCACGTTCACAAAAEST: gi|213614822|gb|DB956958.1|DB956958
genomic: GCCTTATTCTTTCAGATCCTCGTGATTGTTGCATTCCGCCAAAGAATAAGgttctttctt ... aaactgtcagATTGTGGGAGATGTCATCATGGTGGATCGAGGCAACTGCACGTTCACAAAA
EST: GCCTTATTCTTTCAGATCCTCGTGATTGTTGCATTCCGCCAAAGAATAAG ATTGTGGGAGATGTCATCATGGTGGATCGAGGCAACTGCACGTTCACAAAAEST: gi|298165710|gb|HO008681.1|HO008681
genomic: GCCTTATTCTTTCAGATCCTCGTGATTGTTGCATTCCGCCAAAGAATAAGgttctttctt ... aaactgtcagATTGTGGGAGATGTCATCATGGTGGATCGAGGCAACTGCACGTTCACAAAA
EST: ATTCCGCCAAAGAATAAG ATTGTGGGAGATGTCATCATGGTGGATCGAGGCAACTGCACGTTCACAAAA
genomic: ATTCCGCCAAAGAATAAGgttctttctt ... aaactgtcagATTGTGGGAGATGTCATCATGGTGGATCGAGGCAACTGCACGTTCACAAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAGATTTGGCAGAGCCATTGTGTCCAAAGAGAAAAATGCAAAGCACACGCGCCTTATTCTTTCAGATCCTCGTGATTGTTGCATTCCGCCAAAGAATAAGgttctttcttcatgtgtgacatgttgtattgtactttactttggtcactagtgtagcaaagtactaacatgttagtagttcaactgtgttgtgtaaactgtcag
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