1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CCCAAAAGATGACGGAACACTAGTATCATATGTAGGATTCAGAATTCAACATGACAATGCTCGTGGACCGATGAAAGGAGGGATTCGTTATCACCCGGAGgtacacttctttctctcttcgatttgttattttctgttttttttttttgtgtcatgtgatgtgcgtgcatgaactccacgttgcttacactagttttttt...
species | Glycine max |
transcript | GLYMA01G41310.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ATGACAATGCTCGTGGACCGATGAAAGGAGGGATTCGTTATCACCCAGAG GTTGACCCTGATGAAGTGAATGCTCTAGCTCAGCTAATGACATGGAAGACAEST: gi|298195615|gb|HO044006.1|HO044006
genomic: ATGACAATGCTCGTGGACCGATGAAAGGAGGGATTCGTTATCACCCGGAGgtacacttct ... gggatgtcagGTTGACCCTGATGAAGTGAATGCTCTAGCTCAGCTAATGACATGGAAGACA
EST: ATGACAATGCTCGTGGACCGATGAAAGGAGGGATTCGTTATCACCCAGAG GTTGACCCTGATGAAGTGAATGCTCTAGCTCAGCTAATGACATGGAAGACAEST: gi|18735601|gb|BM528858.1|BM528858
genomic: ATGACAATGCTCGTGGACCGATGAAAGGAGGGATTCGTTATCACCCGGAGgtacacttct ... gggatgtcagGTTGACCCTGATGAAGTGAATGCTCTAGCTCAGCTAATGACATGGAAGACA
EST: ATGACAATGCTCGTGGACCGATGAAAGGAGGGATTCGTTATCACCCAGAG GTTGACCCTGATGAAGTGAATGCTCTAGCTCAGCTAATGACATGGAAGACAEST: gi|207761587|gb|GD731578.1|GD731578
genomic: ATGACAATGCTCGTGGACCGATGAAAGGAGGGATTCGTTATCACCCGGAGgtacacttct ... gggatgtcagGTTGACCCTGATGAAGTGAATGCTCTAGCTCAGCTAATGACATGGAAGACA
EST: ATGACAATGCTCGTGGACCGATGAAAGGAGGGATTCGTTATCACCCGGAG GTTGACCCTGATGAAGTGAATGCTCTAGCTCAGCTAATGACATGGAAGACAEST: gi|16996482|gb|BM085854.1|BM085854
genomic: ATGACAATGCTCGTGGACCGATGAAAGGAGGGATTCGTTATCACCCGGAGgtacacttct ... gggatgtcagGTTGACCCTGATGAAGTGAATGCTCTAGCTCAGCTAATGACATGGAAGACA
EST: ATGACAATGCTCGTGGACCGATGAAAGGAGGGATTCGTTATCACCCAGAG GTTGACCCTGATGAAGTGAATGCTCTAGCTCAGCTAATGACATGGAAGACA
genomic: ATGACAATGCTCGTGGACCGATGAAAGGAGGGATTCGTTATCACCCGGAGgtacacttct ... gggatgtcagGTTGACCCTGATGAAGTGAATGCTCTAGCTCAGCTAATGACATGGAAGACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCCAAAAGATGACGGAACACTAGTATCATATGTAGGATTCAGAATTCAACATGACAATGCTCGTGGACCGATGAAAGGAGGGATTCGTTATCACCCGGAGgtacacttctttctctcttcgatttgttattttctgttttttttttttgtgtcatgtgatgtgcgtgcatgaactccacgttgcttacactagttttttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctctcttc