1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TTGATATTAAAAGAAAAATCATTATGTGCAAAGCTTTCTGATATGGGAATTAGTAAACGCCTTCTTGAGGATATGTCTTCTTTGGGTCACACTGTTACTGgtgagtagaagcgttaattttacaggtcttaactcttaatcaattctttgttcttattcttaatcttacaataaggttcaattccttaattgcatgtag
species | Glycine max |
transcript | GLYMA01G36200.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TAGTAAACGCCTTCTTGAGGATATGTCTTCTTTGGGTCACACTGTTACTG GCTGTGGAAGTTCAGGGTGGCAAGCACCGGAGCAACTTGTTCAAGGACGTCEST: gi|192323605|gb|FK017126.1|FK017126
genomic: TAGTAAACGCCTTCTTGAGGATATGTCTTCTTTGGGTCACACTGTTACTGgtgagtagaa ... ttgcatgtagGCTGTGGAAGTTCAGGGTGGCAAGCACCGGAGCAACTTGTTCAAGGACGTC
EST: TAGTAAACGCCTTCTTAAGGATATGTCTTCTTTGGGTCACACTGTTACTG GCTGTGGAAGTTCAGGGTGGCAAGCACCGGAGCAACTTGTTCAAGGACGTC
genomic: TAGTAAACGCCTTCTTGAGGATATGTCTTCTTTGGGTCACACTGTTACTGgtgagtagaa ... ttgcatgtagGCTGTGGAAGTTCAGGGTGGCAAGCACCGGAGCAACTTGTTCAAGGACGTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGATATTAAAAGAAAAATCATTATGTGCAAAGCTTTCTGATATGGGAATTAGTAAACGCCTTCTTGAGGATATGTCTTCTTTGGGTCACACTGTTACTGgtgagtagaagcgttaattttacaggtcttaactcttaatcaattctttgttcttattcttaatcttacaataaggttcaattccttaattgcatgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT