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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGATAGACTATTCTACCACAAATTGTACGACCGATATGTCAAGCGCACGTCTAAGTTTATGGCTCATGATGAGCACAATCATTGTAACATCGGTGACCGAgttagtttcattgattcttttgtgtattgtgcttttggcatgattggttctactctgggttttgcaagatggcttattgagtggctgcttttgtgattgttgttgcag

Basic information

species Glycine max
transcript GLYMA01G31470.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|11689001|gb|BF596607.1|BF596607
EST:     CTAAGTTTATGGCTCATGATGAGCACAATCATTGTAACATCGGTGACCGA                         GTTCGGCTGGATCCTTCTAAGCCTTTGAGTAAGCATAAACATTGGGCAGTT
genomic: CTAAGTTTATGGCTCATGATGAGCACAATCATTGTAACATCGGTGACCGAgttagtttca ... gttgttgcagGTTCGGCTGGATCCTTCTAGGCCTTTGAGTAAGCATAAACATTGGGCAGTT
EST: gi|192301659|gb|FG994381.1|FG994381
EST:     CTAAGTTTATGGCTCATGATGAGCACAATCATTGTAACATCGGTGACCGA                         GTTCGGCTGGATCCTTCTAGGCCTTTGAGTAAGCATAAACATTGGGCAGTT
genomic: CTAAGTTTATGGCTCATGATGAGCACAATCATTGTAACATCGGTGACCGAgttagtttca ... gttgttgcagGTTCGGCTGGATCCTTCTAGGCCTTTGAGTAAGCATAAACATTGGGCAGTT
EST: gi|8826720|gb|BE210450.1|BE210450
EST:     CTAAGTTTATGGCTCATGATGAGCACAATCATTGTAACATCGGTGACCGA                         GTTCGGCTGGATCCTTCTAGGCCTTTGAGTAAGCATAAACATTGGGCAGTT
genomic: CTAAGTTTATGGCTCATGATGAGCACAATCATTGTAACATCGGTGACCGAgttagtttca ... gttgttgcagGTTCGGCTGGATCCTTCTAGGCCTTTGAGTAAGCATAAACATTGGGCAGTT
EST: gi|15201950|gb|BI425143.1|BI425143
EST:     CTAAGTTTATGGCTCATGATGAGCACAATCATTGTAACATCGGTGACCGA                         GTTCGGCTGGATCCTTCTAGGCCTTTGAGTAAGCATAAACATTGGGCAGTT
genomic: CTAAGTTTATGGCTCATGATGAGCACAATCATTGTAACATCGGTGACCGAgttagtttca ... gttgttgcagGTTCGGCTGGATCCTTCTAGGCCTTTGAGTAAGCATAAACATTGGGCAGTT