1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TCGTGTTCTTTTTATTGGCGGTAAAATGCCAGAAGATATTGTTTACCAACACCCTTTGTTTGGTGGCAAGATATCTAGCACATTCCCCCACAGATTCCAGgtcattgtctttttttttttttttgttctttgcataaaccattggaagacactgtgtgactttagttttgctgaaattaaggttctggttatttgttgtag
species | Glycine max |
transcript | GLYMA01G05430.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ACCCTTTGTTTGGTGGCAAGATATCTAGCACATTCCCCCACAGATTCCAG GATGTCAGCAGCATTCGACAAGTCCCTGATCATCAGEST: gi|298182312|gb|HO026487.1|HO026487
genomic: ACCCTTTGTTTGGTGGCAAGATATCTAGCACATTCCCCCACAGATTCCAGgtcattgtct ... tttgttgtagGATGTCAGCAGCATTCGACAAGTCCCTGATCATCAG
EST: ACCCTTTGTTTGGTGGCAAGATATCTAGCACATTCCCCCACAGATTCCAG GATGGTCAGCAGCATTCGACAAGTCCCTGATCATCAG
genomic: ACCCTTTGTTTGGTGGCAAGATATCTAGCACATTCCCCCACAGATTCCAGgtcattgtct ... tttgttgtagGAT-GTCAGCAGCATTCGACAAGTCCCTGATCATCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCGTGTTCTTTTTATTGGCGGTAAAATGCCAGAAGATATTGTTTACCAACACCCTTTGTTTGGTGGCAAGATATCTAGCACATTCCCCCACAGATTCCAGgtcattgtctttttttttttttttgttctttgcataaaccattggaagacactgtgtgactttagttttgctgaaattaaggttctggttatttgttgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA