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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAATTGAATCCTATTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTGCAACGAGAAACTgtaagaattaattgagcagtgaatacatttcaagtgacttttactggcttgtgtttagcagtggatgttgattttatattctattattattttctccttgtttag

Basic information

species Glycine max
transcript GLYMA01G02850.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208076741|gb|GD877336.1|GD877336
EST:     TTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTGCAACGAGAAACT                         CCTACATCTCAGTTGTCTGAACTATGGTCACCTCTGGAAAGCCAAGGATGG
genomic: TTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTGCAACGAGAAACTgtaagaatta ... ccttgtttagCCTACATCTCAGTTGTCTGAACTATGGTCACCTCTGGAAAGCCAAGGATGG
EST: gi|7147128|gb|AW509050.1|AW509050
EST:     TTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTGCAACGAGAAACT                         CCTACATCTCAGTTGTCTGAACTATGGTCACCTCTGGAAAGCCAAGGATGG
genomic: TTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTGCAACGAGAAACTgtaagaatta ... ccttgtttagCCTACATCTCAGTTGTCTGAACTATGGTCACCTCTGGAAAGCCAAGGATGG
EST: gi|26043675|gb|CA782127.1|CA782127
EST:     TTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTGCAACGAGAAACT                         CCTACATCTCAGTTGTCTGAACTATGGTCACCTCTGGAAAGCCAAGGATGG
genomic: TTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTGCAACGAGAAACTgtaagaatta ... ccttgtttagCCTACATCTCAGTTGTCTGAACTATGGTCACCTCTGGAAAGCCAAGGATGG
EST: gi|7147562|gb|AW509484.1|AW509484
EST:     TTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTGCAACGAGAAACT                         CCTACATCTCAGTTGTCTGAACTATGGTCACCTCTGGAAAGCCAAGGATGG
genomic: TTAAACCTAGGCACTCACGTCTTCTCAGGAGTGCTGTGCAACGAGAAACTgtaagaatta ... ccttgtttagCCTACATCTCAGTTGTCTGAACTATGGTCACCTCTGGAAAGCCAAGGATGG