1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
AACCCTTCGCGTGCATTTAGGTGGGAAGGAGAAAGGTGTTGTCAAAATAGAGTCTGATGAAGTTTCCATTCCTCCTCATTTGATGACTGGTTCTTCACAAgtaagtctgttttgagaaaatctatcagagtaatgagcctaacttgtctattaaatatattaattatgggattgcag
species | Glycine max |
transcript | GLYMA01G01060.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGTCTGATGAAGTTTCCATTCCTCCTCATTTGATGACTGGTTCTTCACAA GAATTATTTGATTTTATAGCATCTAAACTAGCAAAATTCGTTAGTTCTGAGEST: gi|209711628|gb|BW671339.1|BW671339
genomic: AGTCTGATGAAGTTTCCATTCCTCCTCATTTGATGACTGGTTCTTCACAAgtaagtctgt ... gggattgcagGAATTATTTGATTTTATAGCATCTAAACTAGCAAAATTCGTTAGTTCTGAG
EST: AGTCTGATGAAGTTTCCATTCCTCCTCATTTGATGACTGGTTCTTCACAA GAATTATTTGATTTTATAGCATCTAAACTAGCAAAATTCGTTAGTTCTGAGEST: gi|6483088|gb|AW202280.1|AW202280
genomic: AGTCTGATGAAGTTTCCATTCCTCCTCATTTGATGACTGGTTCTTCACAAgtaagtctgt ... gggattgcagGAATTATTTGATTTTATAGCATCTAAACTAGCAAAATTCGTTAGTTCTGAG
EST: GTTTCCATTCCTCCTCATTTGATGACTGGTTCTTCACAA GAATTATTTGATTTTATAGCATCTAAACTAGCAAAATTCGTTAGTTCTGAGEST: gi|209711629|gb|BW671340.1|BW671340
genomic: GTTTCCATTCCTCCTCATTTGATGACTGGTTCTTCACAAgtaagtctgt ... gggattgcagGAATTATTTGATTTTATAGCATCTAAACTAGCAAAATTCGTTAGTTCTGAG
EST: AGTCTGATGAAGTTTCCATTCCTCCTCATTTGATGAGTGGTTCTTCACAA GAATTATTTGATTTTATAGCATCTAAACTAGCAAAATTCGTTTGTTTTGAGEST: gi|14259395|gb|BG882303.1|BG882303
genomic: AGTCTGATGAAGTTTCCATTCCTCCTCATTTGATGACTGGTTCTTCACAAgtaagtctgt ... gggattgcagGAATTATTTGATTTTATAGCATCTAAACTAGCAAAATTCGTTAGTTCTGAG
EST: AGTCTGATGAAGTTTCCATTCCTCCTCATTTGATGACTGGTTCTTNACAA GAATTATTTGATTTTATAGCATCTAAACTAGCAAAATTCGTTAGTTCTGAG
genomic: AGTCTGATGAAGTTTCCATTCCTCCTCATTTGATGACTGGTTCTTCACAAgtaagtctgt ... gggattgcagGAATTATTTGATTTTATAGCATCTAAACTAGCAAAATTCGTTAGTTCTGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AACCCTTCGCGTGCATTTAGGTGGGAAGGAGAAAGGTGTTGTCAAAATAGAGTCTGATGAAGTTTCCATTCCTCCTCATTTGATGACTGGTTCTTCACAAgtaagtctgttttgagaaaatctatcagagtaatgagcctaacttgtctattaaatatattaattatgggattgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC