1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CTTGTGAATTGATGTGGCAGTATATTCTGGAAACTGCTGTTTACCCTAGAGAACCTGCGCCTCTAAAAGAGCTGAGGGAAGCCACTAATAATCACCCTTGgtaattgttctgttctgtctattgtgaatttgattagagactgaaacaaaactagaaactagaaaggctccaacttgttttttcatattcattcag
species | Glycine max |
transcript | GLYMA01G00730.4 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GAACCTGCGCCTCTAAAAGAGCTGAGGGAAGCCACTAATAATCACCCTTG GGGCTTCATTGCTACTTTACCTGAAGCGGGTCAGCTAATGACCTTACTTTTEST: gi|254322295|gb|GR837709.1|GR837709
genomic: GAACCTGCGCCTCTAAAAGAGCTGAGGGAAGCCACTAATAATCACCCTTGgtaattgttc ... attcattcagGGGCTTCATTGCTACTTTACCTGAAGCGGGTCAGCTAATGACCTTACTTTT
EST: GAA-CTGCGCCTCTAAAAGAGCTGAGGGAAGCCACTAATAATCACCCTTG GGGCTTCATTGCTACTTTA-CTGAAGCGGGTCAGCTAATGACCTTACTTTTEST: gi|192328422|gb|FK020710.1|FK020710
genomic: GAACCTGCGCCTCTAAAAGAGCTGAGGGAAGCCACTAATAATCACCCTTGgtaattgttc ... attcattcagGGGCTTCATTGCTACTTTACCTGAAGCGGGTCAGCTAATGACCTTACTTTT
EST: AAAAGAGCTGAGGGAAGCCACTAATAATCACCCTTG GGGCTTCATTGCTACTTTACCTGAAGCGGGTCAGCTAATGACCTTACTTTT
genomic: AAAAGAGCTGAGGGAAGCCACTAATAATCACCCTTGgtaattgttc ... attcattcagGGGCTTCATTGCTACTTTACCTGAAGCGGGTCAGCTAATGACCTTACTTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTGTGAATTGATGTGGCAGTATATTCTGGAAACTGCTGTTTACCCTAGAGAACCTGCGCCTCTAAAAGAGCTGAGGGAAGCCACTAATAATCACCCTTGgtaattgttctgttctgtctattgtgaatttgattagagactgaaacaaaactagaaactagaaaggctccaacttgttttttcatattcattcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA