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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGACAGACCGATAAATAAAAATTCTCTGTTAGCTAAGTTTGTTGATGGAAGTGATGCATTTCGGGACTCAAGATTCAAACTTATTCCAAGTATAGTTGAGgtgtgtgatcctcaatgaagtgttatatatgccctatttgatgactgatagcatttgtcagttgatagttttcaattgatacag

Basic information

species Glycine max
transcript GLYMA17G11250.1
intron # 19
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|58020071|gb|CX706813.1|CX706813
EST:     GTGATGCATTTCGGGACTCAAGATTCAAACTTATTCCAAGTATAGTTGAG                         GGATATTGGATGGTCAAGAGAGCTGTAGGAACCAAAGCTTGCCTTTTAGGA
genomic: GTGATGCATTTCGGGACTCAAGATTCAAACTTATTCCAAGTATAGTTGAGgtgtgtgatc ... attgatacagGGATATTGGATGGTCAAGAGAGCTGTAGGAACCAAAGCTTGCCTCTTAGGA
EST: gi|208334115|gb|GE130786.1|GE130786
EST:     GTGATGCATTTCGAGACTCAAGATTCAAACTTATTCCAAGTATAGTTGAG                         GGATATTGGATGGTCAAGAGAGCTGTAGGAACCAAAGCTTGCCTCTTAGGA
genomic: GTGATGCATTTCGGGACTCAAGATTCAAACTTATTCCAAGTATAGTTGAGgtgtgtgatc ... attgatacagGGATATTGGATGGTCAAGAGAGCTGTAGGAACCAAAGCTTGCCTCTTAGGA
EST: gi|207840071|gb|GD809592.1|GD809592
EST:     GTGATGCATTTCGAGACTCAAGATTCAAACTTATTCCAAGTATAGTTGAG                         GGATATTGGATGGTCAAGAGAGCTGTAGGAACCAAAGCTTGCCTCTTAGGA
genomic: GTGATGCATTTCGGGACTCAAGATTCAAACTTATTCCAAGTATAGTTGAGgtgtgtgatc ... attgatacagGGATATTGGATGGTCAAGAGAGCTGTAGGAACCAAAGCTTGCCTCTTAGGA
EST: gi|207729138|gb|GD704906.1|GD704906
EST:     GTGATGCATTTCGGGACTCAAGATTCAAACTTATTCCAAGTATAGTTGAG                         GGATATTGGATGGTCAAGAGAGCTGTAGGAACCAAAGCTTGCCTCTTAGGA
genomic: GTGATGCATTTCGGGACTCAAGATTCAAACTTATTCCAAGTATAGTTGAGgtgtgtgatc ... attgatacagGGATATTGGATGGTCAAGAGAGCTGTAGGAACCAAAGCTTGCCTCTTAGGA