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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGATATCAATATTGGATCTTCAACTGTTGCAAGGGGGGTGGTCAACCTAGTTCTTGGATACTTAAACAATTTGGTCGTAGGAATGGCATTTCTGATACAGgtacacataaaagtatcagtactgttagactaaggtgaagaattgaacatccatttaggtcctctgaagatatatttcttcgttttgattattagtatat...

Basic information

species Glycine max
transcript GLYMA16G27160.1
intron # 19
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA16G27160.1 (Glycine max), 5'ss of exon 19
lower sequence: AT3G54800.2 (Arabidopsis thaliana), 5'ss of exon 15
GGATATCAATATTGGATCTTCAACTGTTGCAAGGGGGGTGGTCAACCTAGTTCTTGGATACTTAAACAATTTGGTCGTAGGAATGGCATTTCTGATACAGgtacacataaaagtat-cagtactgttagactaaggtgaagaattgaacatccatttaggtcctctgaagatatatttcttcgttttgattattagtatat-
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TGACATTGATGTTGGGTCTTCAACTGTTGCAAGAGGTGTAACCAATCTTGTTCTTGGGTATCTCAACAATTTGGTTATAGAAATGGCATTTTTGATACAGgtaagcaaaaaaaaaaacagaacaatgttttcgtattgtaagatttattattcagtttaaggatcacataatgatcattttcaatgttgttacaaaaatcag