1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' |
TGCACCACCACCTTTGAGAACTTTTGATCCTCAAACTCCTCCCATGCTTAGAAATGTGGAGCAATATCAGCAGCCTACATTGGGATCTCAATTGTATAATgtcagtaaacctttttaatttcaagtggtatcatcaattatttgaggctacttgtggattaaaccatgactttctatatttcag
species | Glycine max |
transcript | GLYMA12G01290.1 |
intron # | 19 |
splice site | 5' |
intron type | U2 |
EST: GAAATGTGGAGCAATATCAGCAGCCTACATTGGGATCTCAATTGTATAAT ACAACCAATCCACCTTACCAGCCTACACCCCCTGTTCCATCACAAGTGGCCEST: gi|151406859|gb|EV276674.1|EV276674
genomic: GAAATGTGGAGCAATATCAGCAGCCTACATTGGGATCTCAATTGTATAATgtcagtaaac ... tatatttcagACAACCAATCCACCTTACCAGCCTACACCCCCTGTTCCATCACAAGTGGCC
EST: GAAATGTGGAGCAATATCAGCAGCCTACATTGGGATCTCAATTGTATAAT ACAACCAATCCACCTTACCAGTCTACACCCCCTGTTCCATCACAAGTGGCCEST: gi|10237897|gb|BE806785.1|BE806785
genomic: GAAATGTGGAGCAATATCAGCAGCCTACATTGGGATCTCAATTGTATAATgtcagtaaac ... tatatttcagACAACCAATCCACCTTACCAGCCTACACCCCCTGTTCCATCACAAGTGGCC
EST: GAAATGTGGAGCAATATCAGCAGCCTACATTGGGATCTCAATTGTATAAT ACAACCAATCCACCTTACCAGCCTACACCCCCTGTTCCATCACAAGTGGCCEST: gi|21285326|gb|BQ473197.1|BQ473197
genomic: GAAATGTGGAGCAATATCAGCAGCCTACATTGGGATCTCAATTGTATAATgtcagtaaac ... tatatttcagACAACCAATCCACCTTACCAGCCTACACCCCCTGTTCCATCACAAGTGGCC
EST: GAAATGTGGAGCAATATCAGCAGCCTACATTGGGATCTCAATTGTATAAT ACAACCAATCCACCTTACCAGCCTACACCCCCTGTTCCATCACAAGTGGCCEST: gi|11274739|gb|BF325074.1|BF325074
genomic: GAAATGTGGAGCAATATCAGCAGCCTACATTGGGATCTCAATTGTATAATgtcagtaaac ... tatatttcagACAACCAATCCACCTTACCAGCCTACACCCCCTGTTCCATCACAAGTGGCC
EST: GAAATGTGGAGCAATATCAGCAGCCTACATTGGGATCTCAATTGTATAAT ACAACCAATCCACCTTACCAGCCTACACCCCCTGTTCCATCACAAGTGGCCEST: gi|17402051|gb|BM178833.1|BM178833
genomic: GAAATGTGGAGCAATATCAGCAGCCTACATTGGGATCTCAATTGTATAATgtcagtaaac ... tatatttcagACAACCAATCCACCTTACCAGCCTACACCCCCTGTTCCATCACAAGTGGCC
EST: GAAATGTGGAGCAATATCAGCAGCCTACATTGGGATCTCAATTGTATAAT ACAACCAATCCACCTTACCAGCCTACACCCCCTGTTCCATCACAAGTGGCC
genomic: GAAATGTGGAGCAATATCAGCAGCCTACATTGGGATCTCAATTGTATAATgtcagtaaac ... tatatttcagACAACCAATCCACCTTACCAGCCTACACCCCCTGTTCCATCACAAGTGGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCACCACCACCTTTGAGAACTTTTGATCCTCAAACTCCTCCCATGCTTAGAAATGTGGAGCAATATCAGCAGCCTACATTGGGATCTCAATTGTATAATgtcagtaaacctttttaatttcaagtggtatcatcaattatttgaggctacttgtggattaaaccatgactttctatatttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA