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CTATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAGgtttgttatgcctcactgtttccttgttaacacttccctttttgactgtttcttcctgcaccctataaatctcacattacaccccttttcattacggaaa...
species | Glycine max |
transcript | GLYMA08G16770.1 |
intron # | 19 |
splice site | 5' |
intron type | U2 |
EST: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAG TTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTAEST: gi|10710148|gb|BF009872.1|BF009872
genomic: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAGgtttgttatg ... tggatttcagTTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTA
EST: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAG TTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTAEST: gi|213604400|gb|DB983488.1|DB983488
genomic: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAGgtttgttatg ... tggatttcagTTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTA
EST: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAG TTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTAEST: gi|22934201|gb|BU551340.1|BU551340
genomic: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAGgtttgttatg ... tggatttcagTTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTA
EST: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAG TTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTAEST: gi|31460126|gb|CD402154.1|CD402154
genomic: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAGgtttgttatg ... tggatttcagTTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTA
EST: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAG TTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTAEST: gi|9440345|gb|BE440851.1|BE440851
genomic: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAGgtttgttatg ... tggatttcagTTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTA
EST: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAG TTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTAEST: gi|15287775|gb|BI471666.1|BI471666
genomic: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAGgtttgttatg ... tggatttcagTTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTA
EST: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAG TTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTAEST: gi|15664905|gb|BI702276.1|BI702276
genomic: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAGgtttgttatg ... tggatttcagTTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTA
EST: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAG TTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTAEST: gi|58021230|gb|CX707972.1|CX707972
genomic: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAGgtttgttatg ... tggatttcagTTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTA
EST: CTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAG TTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTAEST: gi|9820752|gb|BE556262.1|BE556262
genomic: CTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAGgtttgttatg ... tggatttcagTTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTA
EST: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAG TTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTAEST: gi|23733765|gb|BU765093.1|BU765093
genomic: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAGgtttgttatg ... tggatttcagTTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTA
EST: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAG TTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTAEST: gi|58014251|gb|CX700993.1|CX700993
genomic: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAGgtttgttatg ... tggatttcagTTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTA
EST: CTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAG TTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTAEST: gi|7590989|gb|AW706731.1|AW706731
genomic: CTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAGgtttgttatg ... tggatttcagTTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTA
EST: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAG TTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTA
genomic: ATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAGgtttgttatg ... tggatttcagTTGATATGGGACAGGGCTCTTGGAATGCCACTCGAAAGGCCGAAAAGTGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTATTATACTGTTCTCTTTGGTGTATCAAGGAGCTTTGGAGTTGGCCCTCAGgtttgttatgcctcactgtttccttgttaacacttccctttttgactgtttcttcctgcaccctataaatctcacattacaccccttttcattacggaaa
- - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - TTGGAG