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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTCTATTTCAACAATATCACTATGGGAGAGGCTCCAAATTTACCTGCATCTGTCAATCTTGCTCGACATATTGCAGAGTGTCCCAATCTGTTTCCAGAAgtaaatatattttttatattttgctgttcaccgctcggttaaaaattcttcaattttgctctaacttttttatgaatttatttgtctggaatctgaaaat...

Basic information

species Glycine max
transcript GLYMA06G00520.1
intron # 19
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA06G00520.1 (Glycine max), 5'ss of exon 19
lower sequence: GRMZM5G869993_T01 (Zea mays), 5'ss of exon 4
TTTCTATTTCAACAATATCACTATGGGAGAGGCTCCAAATTTACCTGCATCTGTCAATCTTGCTCGACATATTGCAGAGTGTCCCAATCTGTTTCCAGAAgtaaatatattttttatattttgctgt-tcaccgctcggttaaaaattcttcaattttgctctaacttttttatgaatt-tatttgtctggaatctgaaaat--------------
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CTTTTACTTTAATAACATTACATCTGGTGACTCACCTCCATCACCAGCTTCAGTAAATCTCGCACGACATATTGGAGAGTGTCCCAATTTGTTTCCTCAGgt---tttgttggattctgtttaccatattatgaaatgtttcaaagtaacataagatagtagtattttatttgtgattgatactgaacttgcttgggacaatctttttttctctag