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GTCATTGTCCCTCTGCTGGTTACCGAGGATGAGAAAACACTCGTTATTTGCATAAATTGCTTAACAAAGgtaaactgtctttagaatgatctattgctctattttggaaagaagtgcccaatgaatcaataatatttcaaaacgcagcaagtatttttatgtccatatc...
species | Glycine max |
transcript | GLYMA03G32710.1 |
intron # | 19 |
splice site | 5' |
intron type | U2 |
EST: TTACCGAGGATGAGAAAACACTCGTTATTTGCATAAATTGCTTAACAAAG CTTGTGGGGCGGCTTTCTCAGGAAGAACTAATGGCTCAGTTACCCTCGTTTEST: gi|19934373|gb|BQ079403.1|BQ079403
genomic: TTACCGAGGATGAGAAAACACTCGTTATTTGCATAAATTGCTTAACAAAGgtaaactgtc ... ttttcttcagCTTGTGGGGCGGCTTTCTCAGGAAGAACTAATGGCTCAGTTACCCTCGTTT
EST: TTACCGAGGATGAGAAAACACTCGTTATTTGCATAAATTGCTTAACAAAG CTTGTGGGGCGGCTTTCTCAGGAAGAACTAATGGCTCAGTTACCCTCGTTTEST: gi|26058393|gb|CA801307.1|CA801307
genomic: TTACCGAGGATGAGAAAACACTCGTTATTTGCATAAATTGCTTAACAAAGgtaaactgtc ... ttttcttcagCTTGTGGGGCGGCTTTCTCAGGAAGAACTAATGGCTCAGTTACCCTCGTTT
EST: TTACCGAGGATGAGAAAACACTCGTTATTTGCATAAATTGCTTAACAAAG CTTGTGGGGCGGCTTTCTCAGGAAGAACTAATGGCTCAGTTACCCTCGTTTEST: gi|192303381|gb|FG997439.1|FG997439
genomic: TTACCGAGGATGAGAAAACACTCGTTATTTGCATAAATTGCTTAACAAAGgtaaactgtc ... ttttcttcagCTTGTGGGGCGGCTTTCTCAGGAAGAACTAATGGCTCAGTTACCCTCGTTT
EST: TTACCGAGGATGAGAAAACACTCGTTATTTGTATAAATTGCTTAACAAAG CTTGTGGGGCGGCTTTCTCAGGAAGAACTAATGGCTCAGTTACCCTCGTTTEST: gi|58021485|gb|CX708226.1|CX708226
genomic: TTACCGAGGATGAGAAAACACTCGTTATTTGCATAAATTGCTTAACAAAGgtaaactgtc ... ttttcttcagCTTGTGGGGCGGCTTTCTCAGGAAGAACTAATGGCTCAGTTACCCTCGTTT
EST: TTACCGAGGATGAGAAAACACTCGTTATTTGCATAAATTGCTTAACAAAG CTTGTGGGGCGGCTTTCTCAGGAAGAACTAATGGCTCAGTTACCCTCGTTT
genomic: TTACCGAGGATGAGAAAACACTCGTTATTTGCATAAATTGCTTAACAAAGgtaaactgtc ... ttttcttcagCTTGTGGGGCGGCTTTCTCAGGAAGAACTAATGGCTCAGTTACCCTCGTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCATTGTCCCTCTGCTGGTTACCGAGGATGAGAAAACACTCGTTATTTGCATAAATTGCTTAACAAAGgtaaactgtctttagaatgatctattgctctattttggaaagaagtgcccaatgaatcaataatatttcaaaacgcagcaagtatttttatgtccatatc
- - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggaaagaa