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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCTGAGGAGATGCAAGCAATAAACAAAGGATTAGAAAAGGTGGTACAGGAACTATCAACCTCTGAAAATGACGGGCCTATATCAGAAACTTTCCGCAAGgtataagtgtcatgccttttcttctactataattgattaagccaactactgtcttttcttttcttaaattgcccttgttcattttcgctgcttcaagttt...

Basic information

species Glycine max
transcript GLYMA02G36440.1
intron # 19
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|58023146|gb|CX709887.1|CX709887
EST:     AACTATCAACCTCTGAAAATGACGGGCCTATATCAGAAACTTTCCGCAAG                         AAATTGAAAGATTTCCTCGGTTCTGCTGAAGCTGATGTCCGTTCATTGGCT
genomic: AACTATCAACCTCTGAAAATGACGGGCCTATATCAGAAACTTTCCGCAAGgtataagtgt ... tttgccacagAAATTGAAAGATTTCCTCGGTTCTGCTGAAGCTGATGTCCGTTCATTGGCT
EST: gi|208187364|gb|GD982202.1|GD982202
EST:     AACTATCAACCTCTGAAAATGACGGGCCTATATCAGAAACTTTCCGCAAG                         AAATTGAAAGATTTCCTCGGTTCTGCTGAAGCTGATGTCCGTTCATTGGCT
genomic: AACTATCAACCTCTGAAAATGACGGGCCTATATCAGAAACTTTCCGCAAGgtataagtgt ... tttgccacagAAATTGAAAGATTTCCTCGGTTCTGCTGAAGCTGATGTCCGTTCATTGGCT
EST: gi|57574575|gb|CX547550.1|CX547550
EST:     AACTATCAACCTCTGAAAATGACGGGCCTATATCAGAAACTTTCCGCAAG                         AAATTGAAAGATTTCCTCGGTTCTGCTGAAGCTGATGTCCGTTCATTGGCT
genomic: AACTATCAACCTCTGAAAATGACGGGCCTATATCAGAAACTTTCCGCAAGgtataagtgt ... tttgccacagAAATTGAAAGATTTCCTCGGTTCTGCTGAAGCTGATGTCCGTTCATTGGCT
EST: gi|207704445|gb|GD684112.1|GD684112
EST:     AACTATCAACCTCTGAAAATGACGGGCCTATATCAGAAACTTTCCGCAAG                         AAATTGAAAGATTTCCTCGGTTCTGCTGAAGCTGATGTCCGTTCATTGGCT
genomic: AACTATCAACCTCTGAAAATGACGGGCCTATATCAGAAACTTTCCGCAAGgtataagtgt ... tttgccacagAAATTGAAAGATTTCCTCGGTTCTGCTGAAGCTGATGTCCGTTCATTGGCT
EST: gi|207803104|gb|GD774821.1|GD774821
EST:     AACTATCAACCTCTGAAAATGACGGGCCTATATCAGAAACTTTCCGCAAG                         AAATTGAAAGATTTCCTCGGTTCTGCTGAAGCTGATGTCCGTTCATTGGCT
genomic: AACTATCAACCTCTGAAAATGACGGGCCTATATCAGAAACTTTCCGCAAGgtataagtgt ... tttgccacagAAATTGAAAGATTTCCTCGGTTCTGCTGAAGCTGATGTCCGTTCATTGGCT
EST: gi|208255788|gb|GE052767.1|GE052767
EST:     AACTATCAACCTCTGAAAATGACGGGCCTATATCAGAAACTTTCCGCAAG                         AAATTGAA-GATTTCCTCGGTTCTG
genomic: AACTATCAACCTCTGAAAATGACGGGCCTATATCAGAAACTTTCCGCAAGgtataagtgt ... tttgccacagAAATTGAAAGATTTCCTCGGTTCTG