1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
GGGGAGAGGGATTTATCAAACCTCAGTGCAACTTGTAACTTCTGCTATTAAAGgttggacttttagcatcatgtgtctttctttaccatttatttctttttgaatttaccttttttattacaacaatgctgccaatag
species | Glycine max |
transcript | GLYMA02G01060.3 |
intron # | 19 |
splice site | 5' |
intron type | U2 |
EST: AAACCTCAGTGCAACTTGTAACTTCTGCTATTAAAG GATATTGTGGAGCAACAAGCAGCAGGCTTAATGAAAGAAGCAGAGCGGTTCEST: gi|9820516|gb|BE556026.1|BE556026
genomic: AAACCTCAGTGCAACTTGTAACTTCTGCTATTAAAGgttggacttt ... ctgccaatagGATATTGTGGAGCAACAAGCAGCAGGCTTAATGAAAGAAGCAGAGCGGTTC
EST: GAGAGGGATTTATCAAACCTCACTGCAACTTGTAACTTCTGCTATTAAAG GATATTGTGGAGCAACAAGCAGCAGGCTTAATGAAAGAATCAGAGCGGTTCEST: gi|6847020|gb|AW349310.1|AW349310
genomic: GAGAGGGATTTATCAAACCTCAGTGCAACTTGTAACTTCTGCTATTAAAGgttggacttt ... ctgccaatagGATATTGTGGAGCAACAAGCAGCAGGCTTAATGAAAGAAGCAGAGCGGTTC
EST: CAGTGCAACTTGTAACTTCTGCTATTAAAG GATATTGTGGAGCAACAAGCAGCAGGCTTAATGAAAGAAGCAGAGCGGTTC
genomic: CAGTGCAACTTGTAACTTCTGCTATTAAAGgttggacttt ... ctgccaatagGATATTGTGGAGCAACAAGCAGCAGGCTTAATGAAAGAAGCAGAGCGGTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGGAGAGGGATTTATCAAACCTCAGTGCAACTTGTAACTTCTGCTATTAAAGgttggacttttagcatcatgtgtctttctttaccatttatttctttttgaatttaccttttttattacaacaatgctgccaatag
- GAGAGG