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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAATCTTTCTTCCAACAATCTTCAGGGCGCAATTCCAATAGAACTGTCGCGGATTGGCAATTTGGATACATTgtaagtataaattatttaatttatatccttgcgctgacatctttaaatttgtactaacagatgatttcctccccag

Basic information

species Glycine max
transcript GLYMA17G34380.1
intron # 18
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193692557|gb|FK627676.1|FK627676
EST:     CAGGGCGCAATTCCAATAGAACTGTCGCGGATTGGCAATTTGGATACATT                         GGATATTTCAAACAATAACTTAGTTGGTTCCATCCCTTCTTCCCTTGGTGA
genomic: CAGGGCGCAATTCCAATAGAACTGTCGCGGATTGGCAATTTGGATACATTgtaagtataa ... tcctccccagGGATATTTCAAACAATAACTTAGTTGGTTCCATCCCTTCTTCCCTTGGTGA
EST: gi|193312538|gb|FK275202.1|FK275202
EST:     CAGGGCGCAATTCCAATAGAACTGTCGCGGATTGGCAATTTGGATACATT                         GGATATTTCAAACAATAACTTAGTTGGTTCCATCCCTTCTTCCCTTGGTGA
genomic: CAGGGCGCAATTCCAATAGAACTGTCGCGGATTGGCAATTTGGATACATTgtaagtataa ... tcctccccagGGATATTTCAAACAATAACTTAGTTGGTTCCATCCCTTCTTCCCTTGGTGA
EST: gi|193363851|gb|FK329657.1|FK329657
EST:     CAGGGCGCAATTCCAATAGAACTGTCGCGGATTGGCAATTTGGATACATT                         GGATATTTCAAACAATAACTTAGTTGGTTCCATCCCTTCTTCCCTTGGTGA
genomic: CAGGGCGCAATTCCAATAGAACTGTCGCGGATTGGCAATTTGGATACATTgtaagtataa ... tcctccccagGGATATTTCAAACAATAACTTAGTTGGTTCCATCCCTTCTTCCCTTGGTGA
EST: gi|208193231|gb|GD992004.1|GD992004
EST:     CAGGGCGCAATTCCAATAGAACTGTCGCGGATTGGCAATTTGGATACATT                         GGATATTTCAAACAATAACTTAGTTGGTTCCATCCCTTCTTCCCTTGGTGA
genomic: CAGGGCGCAATTCCAATAGAACTGTCGCGGATTGGCAATTTGGATACATTgtaagtataa ... tcctccccagGGATATTTCAAACAATAACTTAGTTGGTTCCATCCCTTCTTCCCTTGGTGA