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ATGCTGTACCAGTAACTCACAATCCTCCTGCTCATTCAATGAGATCAAGGCGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAGgttttactttctttcctcctcaatacatgtctcactaatgtgatgagcgcttctaatgaaatcagttagttatttttttttttcacttcatttatgaacc...
species | Glycine max |
transcript | GLYMA17G14450.1 |
intron # | 18 |
splice site | 5' |
intron type | U2 |
EST: CGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAG CGACTCGGTGCTAAAACATGCATCCAGTGATTTCAAGAAAATGGGGCAACGEST: gi|193419802|gb|FK382430.1|FK382430
genomic: CGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAGgttttacttt ... tggtatatagCGACTCGGTGCTAAAACATGCATCCAGTGATTTCAAGAAAATGGGGCAACG
EST: CGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAG CGACTCGGTGCTAAAACATGCATCCAGTGATTTCAAEST: gi|213606905|gb|DB974354.1|DB974354
genomic: CGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAGgttttacttt ... tggtatatagCGACTCGGTGCTAAAACATGCATCCAGTGATTTCAA
EST: TTCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAG CGACTCGGTTCTAAAACATGCATCCAGTGATTTCAAGAAAATGGGGCAACGEST: gi|58014859|gb|CX701601.1|CX701601
genomic: CGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAGgttttacttt ... tggtatatagCGACTCGGTGCTAAAACATGCATCCAGTGATTTCAAGAAAATGGGGCAACG
EST: CGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAG CGACTCGGTGCTAAAACATGCATCCAGTGATTTCAAGAAAATGGGGCAACGEST: gi|254340092|gb|GR858217.1|GR858217
genomic: CGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAGgttttacttt ... tggtatatagCGACTCGGTGCTAAAACATGCATCCAGTGATTTCAAGAAAATGGGGCAACG
EST: CGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAG CGACTCGGTGCTAAAACATGCATCCAGTGATTTCAAGAAAATGGGGCAACGEST: gi|208143354|gb|GD943268.1|GD943268
genomic: CGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAGgttttacttt ... tggtatatagCGACTCGGTGCTAAAACATGCATCCAGTGATTTCAAGAAAATGGGGCAACG
EST: GGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAG CGATTCGGTGCTAAAACACGCATCCAGTGATTTCAAGAAAGTGGGGCAAAGEST: gi|254321303|gb|GR824620.1|GR824620
genomic: GGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAGgttttacttt ... tggtatatagCGACTCGGTGCTAAAACATGCATCCAGTGATTTCAAGAAAATGGGGCAACG
EST: CGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAG CGACTCGGTGCTAAAACATGCATCCAGTGATTTCAAGAAAATGGGGCAACGEST: gi|6666591|gb|AW278050.1|AW278050
genomic: CGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAGgttttacttt ... tggtatatagCGACTCGGTGCTAAAACATGCATCCAGTGATTTCAAGAAAATGGGGCAACG
EST: CGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAG CGACTCGGTGCTAAAACATGCATCCAGTGATTTCAAGAAAATGGGGCAACGEST: gi|208325196|gb|GE123596.1|GE123596
genomic: CGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAGgttttacttt ... tggtatatagCGACTCGGTGCTAAAACATGCATCCAGTGATTTCAAGAAAATGGGGCAACG
EST: CGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAG CGACTCGGTGCTAAAACAATGCATCCAEST: gi|209720988|gb|BW682467.1|BW682467
genomic: CGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAGgttttacttt ... tggtatatagCGACTCGGTGCTAAAACA-TGCATCCA
EST: CGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAG CGACTCGGTGCTAAAACATGCATCCAGTGATTTCAAGAAAATGGGGCAACGEST: gi|208292619|gb|GE093741.1|GE093741
genomic: CGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAGgttttacttt ... tggtatatagCGACTCGGTGCTAAAACATGCATCCAGTGATTTCAAGAAAATGGGGCAACG
EST: TGATGGATATTCAAG CGACTCGGTGCTAAAACATGCATCCAGTGATTTCAAGAAAATGGGGCAACG
genomic: TGATGGATATTCAAGgttttacttt ... tggtatatagCGACTCGGTGCTAAAACATGCATCCAGTGATTTCAAGAAAATGGGGCAACG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGCTGTACCAGTAACTCACAATCCTCCTGCTCATTCAATGAGATCAAGGCGCACACCAACTTGGGCTCGACCTAGAGGCTCTGATGATGGATATTCAAGgttttactttctttcctcctcaatacatgtctcactaatgtgatgagcgcttctaatgaaatcagttagttatttttttttttcacttcatttatgaacc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttcctcc