1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
GAATAACATTCCGTTTGTTCGTCTTGACGGGACTTTGAATCAGCAGCAGCGAGAAAAAGTAATCAAGCAATTCTCCGAAGACGGCGAAACCCTGgtcttgacatacttcctctcgcatttgtttgtgacctagacagtgtagttaaactggttcaatgcattgactatgcaatacttatttcttgcatcag
species | Glycine max |
transcript | GLYMA12G30540.1 |
intron # | 18 |
splice site | 5' |
intron type | U2 |
EST: AGCAGCGAGAAAAAGTAATCAAGCAATTCTCCGAAGACGGCGAAACCCTG GTGTTGTTAATGTCACTAAAAGCTGGTGGAGTAGGTATAAACCTAACAGCAEST: gi|207838025|gb|GD810359.1|GD810359
genomic: AGCAGCGAGAAAAAGTAATCAAGCAATTCTCCGAAGACGGCGAAACCCTGgtcttgacat ... cttgcatcagGTGTTGTTAATGTCACTAAAAGCTGGTGGAGTAGGTATAAACCTAACAGCA
EST: AGCAGCGAGAAAAAGTAATCAAGCAATTCTCCGAAGACGGCGAAACCCTG GTGTTGTTAATGTCACTAAAAGCTGGTGGAGTAGGTATAAACCTAACAGCAEST: gi|207694182|gb|GD674277.1|GD674277
genomic: AGCAGCGAGAAAAAGTAATCAAGCAATTCTCCGAAGACGGCGAAACCCTGgtcttgacat ... cttgcatcagGTGTTGTTAATGTCACTAAAAGCTGGTGGAGTAGGTATAAACCTAACAGCA
EST: AGCAGCGAGAAAAAGTAATCAAGCAATTCTCCGAAGACGGCGAAACCCTG GTGTTGTTAATGTCACTAAAAGCTGGTGGAGTAGGTATAAACCTAACAGCAEST: gi|208307393|gb|GE107071.1|GE107071
genomic: AGCAGCGAGAAAAAGTAATCAAGCAATTCTCCGAAGACGGCGAAACCCTGgtcttgacat ... cttgcatcagGTGTTGTTAATGTCACTAAAAGCTGGTGGAGTAGGTATAAACCTAACAGCA
EST: AGCAGCGAGAAAAAGTAATCAAGCAATTCTCCGAAGACGGCGAAACCCTG GTGTTGTTAATGTCACTAAAAGCTGGTGGAGTAGGTATAAACCTAACAGCAEST: gi|207771108|gb|GD743871.1|GD743871
genomic: AGCAGCGAGAAAAAGTAATCAAGCAATTCTCCGAAGACGGCGAAACCCTGgtcttgacat ... cttgcatcagGTGTTGTTAATGTCACTAAAAGCTGGTGGAGTAGGTATAAACCTAACAGCA
EST: AGCAGCGAGAAAAAGTAATCAAGCAATTCTCCGAAGACGGCGAAACCCTG GTGTTGTTAATGTCACTAAAAG
genomic: AGCAGCGAGAAAAAGTAATCAAGCAATTCTCCGAAGACGGCGAAACCCTGgtcttgacat ... cttgcatcagGTGTTGTTAATGTCACTAAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAATAACATTCCGTTTGTTCGTCTTGACGGGACTTTGAATCAGCAGCAGCGAGAAAAAGTAATCAAGCAATTCTCCGAAGACGGCGAAACCCTGgtcttgacatacttcctctcgcatttgtttgtgacctagacagtgtagttaaactggttcaatgcattgactatgcaatacttatttcttgcatcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA