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CCTTGCTTCATACATGACAGAAGATGATGTCCGGAAAGGAATCTTGTATCCATCCATTGACTGgtaatgttccttttttttttccttgttatcatttgattttcattttctcatgcctctccttttccctggctcctttctgagctactaagagaaataaaat...
species | Glycine max |
transcript | GLYMA18G46340.1 |
intron # | 17 |
splice site | 5' |
intron type | U2 |
EST: ATGACAGAAGATGATGTCCGGAAAGGAATCTTGTATCCATCCATTGACTG TATACGAGATGTTACAGCAGAGGTTGGGGCTGCTGTTGTATGTGCAGCAGTEST: gi|6073170|gb|AW102557.1|AW102557
genomic: ATGACAGAAGATGATGTCCGGAAAGGAATCTTGTATCCATCCATTGACTGgtaatgttcc ... tgttctacagTATACGAGATGTTACAGCAGAGGTTGGGGCTGCTGTTGTATGTGCAGCAGT
EST: ATGACAGAAGATGATGTCCGGAAAGGAATCTTGTATCCATCCATTGACTG TATACGAGATGTTACAGCAGAGGTTGGGGCTGCTGTTGTATGTGCAGCAGTEST: gi|254315925|gb|GR825734.1|GR825734
genomic: ATGACAGAAGATGATGTCCGGAAAGGAATCTTGTATCCATCCATTGACTGgtaatgttcc ... tgttctacagTATACGAGATGTTACAGCAGAGGTTGGGGCTGCTGTTGTATGTGCAGCAGT
EST: ATGACAGAAGATGATGTCCGGAAAGGAATCTTGTATCCATCCATTGACTG TATACGAGATGTTACAGCAGA
genomic: ATGACAGAAGATGATGTCCGGAAAGGAATCTTGTATCCATCCATTGACTGgtaatgttcc ... tgttctacagTATACGAGATGTTACAGCAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCTTGCTTCATACATGACAGAAGATGATGTCCGGAAAGGAATCTTGTATCCATCCATTGACTGgtaatgttccttttttttttccttgttatcatttgattttcattttctcatgcctctccttttccctggctcctttctgagctactaagagaaataaaat
- - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cctctcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaataaaa