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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AATGTTCTATTTTGCTCAGATTTCAATGATCATTCAGACCAGTCAGgtgattattagtttcttaccttctatttgcataacaatctttcaaaagctttattatgtttacagagcagagataacccttaactttggaaaggttagag...

Basic information

species Glycine max
transcript GLYMA16G10820.2
intron # 17
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213595777|gb|DB981485.1|DB981485
EST:     TTTGCTCAGATTTCAATGATCATTCAGGCCAGTCAG                         TATTTTGGACATTATGGA-ATCCTGATCAAAATGGAGTTCATAACTCAGCC
genomic: TTTGCTCAGATTTCAATGATCATTCAGACCAGTCAGgtgattatta ... tgtgatatagTATTTTGGACATTAT-TATCTCCTGATCAAAATGGAGTTCATAACTCAGCC
EST: gi|51336439|gb|CO980305.1|CO980305
EST:     AATGTTCTATTTTGCTCAGATTTCAATGATCATTCAGACCAGTCAG                         TATTTTGGACATTATTATCTCCTGATCAAAATGGAGTTCATAACTCAGCCG
genomic: AATGTTCTATTTTGCTCAGATTTCAATGATCATTCAGACCAGTCAGgtgattatta ... tgtgatatagTATTTTGGACATTATTATCTCCTGATCAAAATGGAGTTCATAACTCAGCCG
EST: gi|31307289|gb|CD392492.1|CD392492
EST:     AATGTTCTATTTTGCTCAGATTTCAATGATCATTCAGACCAGTCAG                         TATTTTGGACATTATTATCTCCTGATCAAAATGGAGTTCATAACTCAGCCG
genomic: AATGTTCTATTTTGCTCAGATTTCAATGATCATTCAGACCAGTCAGgtgattatta ... tgtgatatagTATTTTGGACATTATTATCTCCTGATCAAAATGGAGTTCATAACTCAGCCG
EST: gi|31309502|gb|CD394705.1|CD394705
EST:     AATGTTCTATTTTGCTCAGATTTCAATGATCATTCAGACCAGTCAG                         TATTTTGGACATTATTATCTCCTGATCAAAATGGAGTTCATAACTCAGCCG
genomic: AATGTTCTATTTTGCTCAGATTTCAATGATCATTCAGACCAGTCAGgtgattatta ... tgtgatatagTATTTTGGACATTATTATCTCCTGATCAAAATGGAGTTCATAACTCAGCCG
EST: gi|31475258|gb|CD417286.1|CD417286
EST:     AATGTTCTATTTTGCTCAGATTTCAATGATCATTCAGACCAGTCAG                         TATTTTGGACATTATTATCTCCTGATCAAAATGGAGTTCATAACTCAGCCG
genomic: AATGTTCTATTTTGCTCAGATTTCAATGATCATTCAGACCAGTCAGgtgattatta ... tgtgatatagTATTTTGGACATTATTATCTCCTGATCAAAATGGAGTTCATAACTCAGCCG