1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' |
TATTGTTCTAACATCGCATTCACATGATGGAATTCATGTATTTGATGATTTTAGAGAGGCTTATGCGTGGCTAAGTCATAATACAGAAATAGATGATAAAgtaagttctatgggattttattatttttcggctgaaatgcatgtatggtgtcttgtgtacaatttttttaccaatgttgccaaccttgattatctttgcc...
species | Glycine max |
transcript | GLYMA16G08410.1 |
intron # | 17 |
splice site | 5' |
intron type | U2 |
EST: TTAGAGAGGCTTATGCGTGGCTAAGTCATAATACAGAAATAGATGATAAA GTGGCATCTTGGTGGGACTATGGATACCAAACAACTGCCATGGCTAACCGAEST: gi|151406793|gb|EV276608.1|EV276608
genomic: TTAGAGAGGCTTATGCGTGGCTAAGTCATAATACAGAAATAGATGATAAAgtaagttcta ... tttcttgtagGTGGCATCTTGGTGGGACTATGGATACCAAACAACTGCCATGGCTAACCGA
EST: TTAGAGAGGCTTATGCGTGGCTAAGTCATAGTACAGAAATAGATGATAAA GTGGCATCTTGGTGGGACTATGGATACCAAACAACTGCCATGGCTAACCGAEST: gi|24205954|gb|BU965207.1|BU965207
genomic: TTAGAGAGGCTTATGCGTGGCTAAGTCATAATACAGAAATAGATGATAAAgtaagttcta ... tttcttgtagGTGGCATCTTGGTGGGACTATGGATACCAAACAACTGCCATGGCTAACCGA
EST: TTAGAGAGGCTTATGCGTGGCTAAGTCATAATACAGAAATAGATGATAAA GTGGCATCTTGGTGGGACTATGGATACCAAACAACTGCCATGGCTAACCGAEST: gi|193432366|gb|FK394752.1|FK394752
genomic: TTAGAGAGGCTTATGCGTGGCTAAGTCATAATACAGAAATAGATGATAAAgtaagttcta ... tttcttgtagGTGGCATCTTGGTGGGACTATGGATACCAAACAACTGCCATGGCTAACCGA
EST: TGCGTGGCTAAGTCATAATACAGAAATAGATGNTAAA GTGGCATCTTGGTGGGACTATGGATACCAAACAACTGCCATGGCTAACCGAEST: gi|9901315|gb|BE610283.1|BE610283
genomic: TGCGTGGCTAAGTCATAATACAGAAATAGATGATAAAgtaagttcta ... tttcttgtagGTGGCATCTTGGTGGGACTATGGATACCAAACAACTGCCATGGCTAACCGA
EST: TTAGAGAGGCTTATGCGTGGCTAAGTCATAATACAGAAATAGATGATAAA GTGGCATCTTGGTGGGACTATGGATACCAAACAACTGCCATGGCTAACCGAEST: gi|21255716|gb|BQ452604.1|BQ452604
genomic: TTAGAGAGGCTTATGCGTGGCTAAGTCATAATACAGAAATAGATGATAAAgtaagttcta ... tttcttgtagGTGGCATCTTGGTGGGACTATGGATACCAAACAACTGCCATGGCTAACCGA
EST: GCTAAGTCATAATACAGAAATAGATGATAAA GTGGCATCTTGGTGGGACTATGGATACCAAACAACTGCCATGGCTAACCGA
genomic: GCTAAGTCATAATACAGAAATAGATGATAAAgtaagttcta ... tttcttgtagGTGGCATCTTGGTGGGACTATGGATACCAAACAACTGCCATGGCTAACCGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATTGTTCTAACATCGCATTCACATGATGGAATTCATGTATTTGATGATTTTAGAGAGGCTTATGCGTGGCTAAGTCATAATACAGAAATAGATGATAAAgtaagttctatgggattttattatttttcggctgaaatgcatgtatggtgtcttgtgtacaatttttttaccaatgttgccaaccttgattatctttgcc
- - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG