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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGATCAAGACAAAAAATTCTTACACATTTGGGGATCAATACGTTCATTTTAACGTCAGCATTCCAAAgtgagtgttacatttgatatttgaatatagtttatgggctacccagtgcatgtttggatttccatttggaaagatctccaaaccttggtttgagtaaaag...

Basic information

species Glycine max
transcript GLYMA15G42640.1
intron # 17
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|58018599|gb|CX705341.1|CX705341
EST:     TCTTACACATTTGGGGATCAATACGTTCATTTTAACGTCAGCATTCCAAA                         CAATCTGACAGAGAGACAGCGTGAATTGATTGAAGAGTTTGCCAAGGAAGA
genomic: TCTTACACATTTGGGGATCAATACGTTCATTTTAACGTCAGCATTCCAAAgtgagtgtta ... tattctgcagCAATCTGACAGAGAGACAGCGTGAATTGATTGAAGAGTTTGCCAAGGAAGA
EST: gi|18040165|gb|BM308459.1|BM308459
EST:     TCTTACACATTTGGGGATCAATACGTTCATTTTAACGTCAGCATTCCAAA                         CAATCTGACAGAGAGACAGCGTGAATTGATTGAAGAGTTTGCCAAGGAAGA
genomic: TCTTACACATTTGGGGATCAATACGTTCATTTTAACGTCAGCATTCCAAAgtgagtgtta ... tattctgcagCAATCTGACAGAGAGACAGCGTGAATTGATTGAAGAGTTTGCCAAGGAAGA
EST: gi|15664711|gb|BI702082.1|BI702082
EST:     TCTTACACATTTGGGGATCAATACGTTCATTTTAACGTCAGCATTCCAAA                         CAATCTGACAGAGAGACAGCGTGAATTGATTGAAGAGTTTGCCAAGGAAGA
genomic: TCTTACACATTTGGGGATCAATACGTTCATTTTAACGTCAGCATTCCAAAgtgagtgtta ... tattctgcagCAATCTGACAGAGAGACAGCGTGAATTGATTGAAGAGTTTGCCAAGGAAGA