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TTTTGAATGAACTTGAAAATCTTTGCTCATCAGGCTCCAAAAGCATTGTTTTCAGCCAGTGGACTGCTTTTCTAGACCTCTTGCAGATTCCCTTTACTCGgtaagatttgttactagttgaatcatatcattttctaggaaagatgccattcttgtgggagagaatctcagtgagtgtgaatttttcattgtgttgtaat...
species | Glycine max |
transcript | GLYMA12G30540.1 |
intron # | 17 |
splice site | 5' |
intron type | U2 |
EST: TTCAGCCAGTGGACTGCTTTTCTAGACCTCTTGCAGATTCCCTTTACTCG GAATAACATTCCGTTCGTTCGTCTTGACGGGACTTTGAATCAGCGGACAGCEST: gi|193324264|gb|FK292628.1|FK292628
genomic: TTCAGCCAGTGGACTGCTTTTCTAGACCTCTTGCAGATTCCCTTTACTCGgtaagatttg ... tcatgtacagGAATAACATTCCGTTTGTTCGTCTTGACGGGACTTTGAATCAGCAG-CAGC
EST: TTCAGCCAGTGGACTGCTTTTCTAGACCTCTTGCAGATTCCCTTTACTCG GAATAACATTCCGTTTGTTCGTCTTGACEST: gi|207694182|gb|GD674277.1|GD674277
genomic: TTCAGCCAGTGGACTGCTTTTCTAGACCTCTTGCAGATTCCCTTTACTCGgtaagatttg ... tcatgtacagGAATAACATTCCGTTTGTTCGTCTTGAC
EST: CTTGCAGATTCCCTTTACTCG GAATAACATTCCGTTTGTTCGTCTTGACGGGACTTTGAATCAGCAGCAGCGEST: gi|193666288|gb|FK610597.1|FK610597
genomic: CTTGCAGATTCCCTTTACTCGgtaagatttg ... tcatgtacagGAATAACATTCCGTTTGTTCGTCTTGACGGGACTTTGAATCAGCAGCAGCG
EST: TTCAGCCAGTGGACTGCTTTTCTAGACCTCTTGCAGATTCCCTTTACTCG GAATAACATTCCGTTTGTTCGTCTTGACGGGACTTTGAATCAGCAGCEST: gi|208185102|gb|GD984136.1|GD984136
genomic: TTCAGCCAGTGGACTGCTTTTCTAGACCTCTTGCAGATTCCCTTTACTCGgtaagatttg ... tcatgtacagGAATAACATTCCGTTTGTTCGTCTTGACGGGACTTTGAATCAGCAGC
EST: TTCAGCCAGTGGACTGCTTTTCTAGACCTCTTGCAGATTCCCTTTACTCG GAATAACATTCCGTTTGTTCGTCTTGACGGGACTTTGAATCAGCAGCAGCGEST: gi|208307393|gb|GE107071.1|GE107071
genomic: TTCAGCCAGTGGACTGCTTTTCTAGACCTCTTGCAGATTCCCTTTACTCGgtaagatttg ... tcatgtacagGAATAACATTCCGTTTGTTCGTCTTGACGGGACTTTGAATCAGCAGCAGCG
EST: TTCCCTTTACTCG GAATAACATTCCGTTTGTTCGTCTTGACGGGACTTTGAATCAGCAGCAGCGEST: gi|207771108|gb|GD743871.1|GD743871
genomic: TTCCCTTTACTCGgtaagatttg ... tcatgtacagGAATAACATTCCGTTTGTTCGTCTTGACGGGACTTTGAATCAGCAGCAGCG
EST: TTCAGCCAGTGGACTGCTTTTCTAGACCTCTTGCAGATTCCCTTTACTCG GAATAACATTCCGTTTGTTCGTCTTGACGGGACTTTGAATCAGCAGCAGCG
genomic: TTCAGCCAGTGGACTGCTTTTCTAGACCTCTTGCAGATTCCCTTTACTCGgtaagatttg ... tcatgtacagGAATAACATTCCGTTTGTTCGTCTTGACGGGACTTTGAATCAGCAGCAGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTTGAATGAACTTGAAAATCTTTGCTCATCAGGCTCCAAAAGCATTGTTTTCAGCCAGTGGACTGCTTTTCTAGACCTCTTGCAGATTCCCTTTACTCGgtaagatttgttactagttgaatcatatcattttctaggaaagatgccattcttgtgggagagaatctcagtgagtgtgaatttttcattgtgttgtaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gtgggag