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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACTCCGGGATCGGCTGGTTAAGATTATCACTGACTACAGGACTGAAACATCACTCAGAAATGGGTGCAATGATATCCTTAAGgtgtttttctcttttcccttccctctggcgcttccttaggagggcaaattcttaaatctcattaatttggtacagcgaaatatcccactgacttgctgtcattgaaatag

Basic information

species Glycine max
transcript GLYMA11G19660.2
intron # 17
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA11G19660.2 (Glycine max), 5'ss of exon 17
lower sequence: Vv06s0061g00940.t01 (Vitis vinifera), 5'ss of exon 18
ACTCCGGGATCGGCTGGTTAAGATTATCACTGACTACAGGACTGAAACATCACTCAGAAATGGGTGCAATGATATCCTTAAGgtgtttttctcttttcccttccctc-tggcgcttccttaggagggcaaattcttaaatctc--attaatttggtacagcgaaatatcccactgacttgctgtcattgaaatag
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GCTAAGGGATCGCCTAGTCAAAATTATCACTGATTACAGGACTGAAACATCTCTTAGACATGGATGCAACGATATTCTCAAGgtactcctttgcttctcataccagcatagcaatttttcccatagaaaacttcatcatgctggaaatgctttgacatttcggtata----attgtcgaactgtcag--------