1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
GTGAATATGTTGATATGGTTAAAGCTGGAATCATTGATCCATTGAAGGTTATTAGGACCGCCTTGGTTGATGCAGCCAGgtaggatgttgggaaacttgccgttagatattgatgtatttggtttgttttatgtagctttgcttatcaatatttttctcttgcag
species | Glycine max |
transcript | GLYMA10G33680.1 |
intron # | 17 |
splice site | 5' |
intron type | U2 |
EST: ATCATTGATCCATTGAAGGTTATTAGGACCGCCTTGGTTGATGCAGCCAG TGTGTCATCTTTGATGACAACAACTGAAGCTATTGTGTCTGAACTCCCAAAEST: gi|16277372|gb|BI942345.1|BI942345
genomic: ATCATTGATCCATTGAAGGTTATTAGGACCGCCTTGGTTGATGCAGCCAGgtaggatgtt ... tctcttgcagTGTGTCATCTTTGATGACAACAACTGAAGCTATTGTGTCTGAACTCCCAAA
EST: CATTGATCCATTGAAGGTTATTAGGACCGCCTTGGTTGATGCAGCCAG TGTGTCATCTTTGATGACAACAACTGAAGCTATTGTGTCTGAACTCCCAAAEST: gi|16278164|gb|BI942759.1|BI942759
genomic: CATTGATCCATTGAAGGTTATTAGGACCGCCTTGGTTGATGCAGCCAGgtaggatgtt ... tctcttgcagTGTGTCATCTTTGATGACAACAACTGAAGCTATTGTGTCTGAACTCCCAAA
EST: ATCATTGATCCATTGAAGGTTATTAGGACCGCCTTGGTTGATGCAGCCAG TGTGTCATCTTTGATGACAACAACTGAAGCTATTGTGTCTGAACTCCCATAEST: gi|16282089|gb|BI944831.1|BI944831
genomic: ATCATTGATCCATTGAAGGTTATTAGGACCGCCTTGGTTGATGCAGCCAGgtaggatgtt ... tctcttgcagTGTGTCATCTTTGATGACAACAACTGAAGCTATTGTGTCTGAACTCCCAAA
EST: ATCATTGATCCATTGAAGGTTATTAGGACCGCCTTGGTTGATGCAGCCAG TGTGTCATCTTTGATGACAACAACTGAAGCTATTGTGTCTGAACTCCCAAAEST: gi|17400780|gb|BM177562.1|BM177562
genomic: ATCATTGATCCATTGAAGGTTATTAGGACCGCCTTGGTTGATGCAGCCAGgtaggatgtt ... tctcttgcagTGTGTCATCTTTGATGACAACAACTGAAGCTATTGTGTCTGAACTCCCAAA
EST: ATTATTGATCCATTGAAGGTTATTAGGACCGCCTTGGTTGATGCAGCCAG TGTGTCATCTTTGATGACAEST: gi|151399267|gb|EV269138.1|EV269138
genomic: ATCATTGATCCATTGAAGGTTATTAGGACCGCCTTGGTTGATGCAGCCAGgtaggatgtt ... tctcttgcagTGTGTCATCTTTGATGACA
EST: ATCATTGATCCATTGAAGGTTATTAGGACCGCCTTGGTTGATGCAGCCAG TGTGTCATCTTTGATGACAACAACTGAAGCTATTGTGTCTGAACTCCCAAAEST: gi|16276893|gb|BI942097.1|BI942097
genomic: ATCATTGATCCATTGAAGGTTATTAGGACCGCCTTGGTTGATGCAGCCAGgtaggatgtt ... tctcttgcagTGTGTCATCTTTGATGACAACAACTGAAGCTATTGTGTCTGAACTCCCAAA
EST: ATCATTGATCCATTGAAGGTTATTAGGACCGCCTTGGTTGATGCAGCCAG TGTGTCATCTTTGATGACAACAACTGAAGCTATTGTGTCTGAACTCCCAAA
genomic: ATCATTGATCCATTGAAGGTTATTAGGACCGCCTTGGTTGATGCAGCCAGgtaggatgtt ... tctcttgcagTGTGTCATCTTTGATGACAACAACTGAAGCTATTGTGTCTGAACTCCCAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGAATATGTTGATATGGTTAAAGCTGGAATCATTGATCCATTGAAGGTTATTAGGACCGCCTTGGTTGATGCAGCCAGgtaggatgttgggaaacttgccgttagatattgatgtatttggtttgttttatgtagctttgcttatcaatatttttctcttgcag
- - - - - - - - - - - - - - - - - - - - TTGAAG