Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   		13  
 5'  3'   		14  
 5'  3'   		15  
 5'  3'   		16  
 5'  3'   		17  
 5'  3'   		18  
 5'  3'   		19  
 5'  3'   		20  
 5'  3'   
21  
 5'  3'   		22  
 5'  3'   		23  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAGTGTTATCAGACACACCATTAGATGACAGGATCAATAAGGCAAGCAACATCCATGGTCATAACAAACTCAGGAATGTCCGAGTTTCACATCGGgtattgtctcatgcagtcaattaatgtatcaaatttcttttagtgtggtcctgcttccggtatcatctttcacttctttcaattttggcag

Basic information

species Glycine max
transcript GLYMA10G32300.1
intron # 17
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|21889881|gb|BQ743094.1|BQ743094
EST:     CAACATCCATGGTCATAACAAACTCAGGAATGTCCGAGTTTCACATCGG                         ATTGGAAATCCCATGGACTATGACACCTTAAAGGAAACCATTTTGCATATT
genomic: CAACATCCATGGTCATAACAAACTCAGGAATGTCCGAGTTTCACATCGGgtattgtctc ... attttggcagATTGGAAATCCCATGGACTATGACACCTTAAAGGAAACCATTTTGCATATT
EST: gi|7283657|gb|AW596261.1|AW596261
EST:     GCAACATCCATGGTCATAACAAACTCAGGAATGTCCGAGTTTCACATCGG                         ATTGGAAATCCCATGGACTATGACACCTTAAAGGANACCAT
genomic: GCAACATCCATGGTCATAACAAACTCAGGAATGTCCGAGTTTCACATCGGgtattgtctc ... attttggcagATTGGAAATCCCATGGACTATGACACCTTAAAGGAAACCAT
EST: gi|6916400|gb|AW397930.1|AW397930
EST:     GCAACATCCATGGTCATAACAAACTCAGGAATGTCCGAGTTTCACATCGG                         ATTGGAAATCCCATGGACTATGACACCTTAAAGGAAACCATTTTGCATATT
genomic: GCAACATCCATGGTCATAACAAACTCAGGAATGTCCGAGTTTCACATCGGgtattgtctc ... attttggcagATTGGAAATCCCATGGACTATGACACCTTAAAGGAAACCATTTTGCATATT