1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' |
TAATAATGTGATTGAAAAAATATTGCTATTGACACGGAGAGCAGAAAGATACTTGGTTGTTGGTGCTGTCCGGTTCGTTCGAACTATTCTCTCTCGCCATgtaagttatcatttatgcagatatttgtgacttgaaaagcgaatattctaaataatgttaatctgataactgtttggggggaatttacattgagtagata...
species | Glycine max |
transcript | GLYMA07G37040.1 |
intron # | 17 |
splice site | 5' |
intron type | U2 |
EST: ACTTGGTTGTTGGTGCTGTCCGGTTCGTTCGAACTATTCTCTCTCGCCAT GATGAGCATCTGATAAATTATTTTGTTAGGAATAATGTTCTGAAGCCAATTEST: gi|193670142|gb|FK608654.1|FK608654
genomic: ACTTGGTTGTTGGTGCTGTCCGGTTCGTTCGAACTATTCTCTCTCGCCATgtaagttatc ... taacatgcagGATGAGCATCTGATAAATTATTTTGTTAGGAATAATGTTCTGAAGCCAATT
EST: ACTTGGTTGTTGGTGCTGTCCGGTTCGTTCGAACTATTCTCTCTCGCCAT GATGAGCATCTGATAAATTATTTTGTTAGGAATAATGTTCTGAAGCCAATTEST: gi|208237021|gb|GE034301.1|GE034301
genomic: ACTTGGTTGTTGGTGCTGTCCGGTTCGTTCGAACTATTCTCTCTCGCCATgtaagttatc ... taacatgcagGATGAGCATCTGATAAATTATTTTGTTAGGAATAATGTTCTGAAGCCAATT
EST: ACTTGGTTGTTGGTGCTGTCCGGTTCGTTCGAACTATTCTCTCTCGCCAT GATGAGCATCTGATAAATTATTTTGTTAGGAGTAATGTTCTGAAGCCAATTEST: gi|207737399|gb|GD714085.1|GD714085
genomic: ACTTGGTTGTTGGTGCTGTCCGGTTCGTTCGAACTATTCTCTCTCGCCATgtaagttatc ... taacatgcagGATGAGCATCTGATAAATTATTTTGTTAGGAATAATGTTCTGAAGCCAATT
EST: ACTTGGTTGTTGGTGCTGTCCGGTTCGTTCGAACTATTCTCTCTCGCCAT GATGAGCATCTGATAAATTATTTTGTTAGGAATAATGTTCTGAAGCCAATT
genomic: ACTTGGTTGTTGGTGCTGTCCGGTTCGTTCGAACTATTCTCTCTCGCCATgtaagttatc ... taacatgcagGATGAGCATCTGATAAATTATTTTGTTAGGAATAATGTTCTGAAGCCAATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAATAATGTGATTGAAAAAATATTGCTATTGACACGGAGAGCAGAAAGATACTTGGTTGTTGGTGCTGTCCGGTTCGTTCGAACTATTCTCTCTCGCCATgtaagttatcatttatgcagatatttgtgacttgaaaagcgaatattctaaataatgttaatctgataactgtttggggggaatttacattgagtagata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gggggga