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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TAATAAGAGGAAGACACATGAACTGGTAGACCTTCAGAATACGGAAAAACATGCAAGGACAGAGAATGTAACCTGTGTTGGTTTCAGTCAGAATAAACAGgtctgctttggcttattcatcattatgttaaaatttgtttgtacgcatcgttgaggcatattttccaatgatattgttgttaatttacattgcaaacata...

Basic information

species Glycine max
transcript GLYMA04G35870.1
intron # 17
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15815851|gb|BI788126.1|BI788126
EST:     ATGCAAGGACAGAGAATGTAACCTGTGTTGGTTTCAGTCAGAATAAACAG                         ATCATTGCTACTCCAGCTGACCAGGTGTTCGACCGAAAGACTATGCACTTG
genomic: ATGCAAGGACAGAGAATGTAACCTGTGTTGGTTTCAGTCAGAATAAACAGgtctgctttg ... ttttgtgtagATCATTGCTACTCCAGCTGACCAGGTGTTCGACCGAAAGACTATGCACTTG
EST: gi|22929735|gb|BU546874.1|BU546874
EST:     ATGCAAGGACAGAGAATGTAACCTGTGTTGGTTTCAGTCAGAATAAACAG                         ATCATTGCTACTCCAGCTGACCAGGTGTTCGACCGAAAGACTATGCACTTG
genomic: ATGCAAGGACAGAGAATGTAACCTGTGTTGGTTTCAGTCAGAATAAACAGgtctgctttg ... ttttgtgtagATCATTGCTACTCCAGCTGACCAGGTGTTCGACCGAAAGACTATGCACTTG
EST: gi|13311298|gb|BG404949.1|BG404949
EST:     ATGCAAGGACAGAGAATGTAACCTGTGTTGGTTTCAGTCAGAATAAACAG                         ATCATTGCTACTCCAGCTGACCAGGTGTTCGACCGAAAGACTATGCACTTG
genomic: ATGCAAGGACAGAGAATGTAACCTGTGTTGGTTTCAGTCAGAATAAACAGgtctgctttg ... ttttgtgtagATCATTGCTACTCCAGCTGACCAGGTGTTCGACCGAAAGACTATGCACTTG
EST: gi|8402615|gb|BE058258.1|BE058258
EST:     ATGCAAGGACAGAGAATGTAACCTGTGTTGGTTTCAGTCAGAATAAACAG                         ATCATTGCTACTCCAGCTGACCAGGTGTTCGACCG
genomic: ATGCAAGGACAGAGAATGTAACCTGTGTTGGTTTCAGTCAGAATAAACAGgtctgctttg ... ttttgtgtagATCATTGCTACTCCAGCTGACCAGGTGTTCGACCG