1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
AGGGGAATGTGTTCATGAACTTAGCTGTAATGGCAATAAGTTTCATGCATCTGTTTTCCACCCAACGTACCCTTCATTGCTGGTCATTGGCTGTTACCAGgcaagtctgcattcttttttattcagtttttcatttcttttcgtttttttttggtgaatttggttgtttgtccccaaaatatgaaattaattgacaaaga...
species | Glycine max |
transcript | GLYMA04G07460.1 |
intron # | 17 |
splice site | 5' |
intron type | U2 |
EST: CTGTTTTCCACCCAACGTACCCTTCATTGCTGGTCATTGGCTGTTACCAG TCATTGGAGCTGTGGAATATGAGCGACAACAAGACAATGACTCTGTCTGCTEST: gi|193609830|gb|FK565296.1|FK565296
genomic: CTGTTTTCCACCCAACGTACCCTTCATTGCTGGTCATTGGCTGTTACCAGgcaagtctgc ... gtaactgtagTCATTGGAGCTGTGGAATATGAGCGAGAACAAGACAATGACTCTGTCTGCT
EST: CTGTTTTCCACCCAACGTACCCTTCATTGCTGGTCATTGGCTGTTACCAG TCATTGGAGCTGTGGAATATGAGCGAGAACAAGACAATGACTCTGTCTGCTEST: gi|208341281|gb|GE134077.1|GE134077
genomic: CTGTTTTCCACCCAACGTACCCTTCATTGCTGGTCATTGGCTGTTACCAGgcaagtctgc ... gtaactgtagTCATTGGAGCTGTGGAATATGAGCGAGAACAAGACAATGACTCTGTCTGCT
EST: GTACCCTTCATTGCTGGTCATTGGCTGTTACCAG TCATTGGAGCTGTGGAATATGAGCGAGAACAAGACAATGACTCTGTCTGCTEST: gi|207803361|gb|GD775344.1|GD775344
genomic: GTACCCTTCATTGCTGGTCATTGGCTGTTACCAGgcaagtctgc ... gtaactgtagTCATTGGAGCTGTGGAATATGAGCGAGAACAAGACAATGACTCTGTCTGCT
EST: CTGTTTTCCACCCAACGTACCCTTCATTGCTGGTCATTGGCTGTTACCAG TCATTGGAGCTGTGGAATATGAGCGAGAACAAGACAATGACTCTGTCTGCTEST: gi|10255742|gb|BE823452.1|BE823452
genomic: CTGTTTTCCACCCAACGTACCCTTCATTGCTGGTCATTGGCTGTTACCAGgcaagtctgc ... gtaactgtagTCATTGGAGCTGTGGAATATGAGCGAGAACAAGACAATGACTCTGTCTGCT
EST: CTGTTTTCCACCCAACGTACCCTTCATTGCTGGTCATTGGCTGTTACCAG TCATTGGAGCTGTGGAATATGAGCGAGAACAAGACAATGACTCTGTCTGCTEST: gi|31473959|gb|CD415987.1|CD415987
genomic: CTGTTTTCCACCCAACGTACCCTTCATTGCTGGTCATTGGCTGTTACCAGgcaagtctgc ... gtaactgtagTCATTGGAGCTGTGGAATATGAGCGAGAACAAGACAATGACTCTGTCTGCT
EST: CTGTTTTCCACCCAACGTACCCTTCATTGCTGGTCATTGGCTGTTACCAG TCATTGGAGCTGTGGAATATGAGCGAGAACAAGACAATGACTCTGTCTGCT
genomic: CTGTTTTCCACCCAACGTACCCTTCATTGCTGGTCATTGGCTGTTACCAGgcaagtctgc ... gtaactgtagTCATTGGAGCTGTGGAATATGAGCGAGAACAAGACAATGACTCTGTCTGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGGGAATGTGTTCATGAACTTAGCTGTAATGGCAATAAGTTTCATGCATCTGTTTTCCACCCAACGTACCCTTCATTGCTGGTCATTGGCTGTTACCAGgcaagtctgcattcttttttattcagtttttcatttcttttcgtttttttttggtgaatttggttgtttgtccccaaaatatgaaattaattgacaaaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tccccaa