1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
TGATTTTGAGCGTGTGGATGAGTATGGTCTTGGTCCTAGAGAGAGTTTGGCTGAAGCTGTAAATACTGTTATCAACCTACTTGGCTTGGAGCCTTGTGAGgtaagctgatgatgtcaattgctgctttgataaactctcttttgagatcattttatttaacttgtatattgcacgtgttgcgtacaaaggttgcacaaag...
species | Glycine max |
transcript | GLYMA04G01470.1 |
intron # | 17 |
splice site | 5' |
intron type | U2 |
EST: CTGAAGCTGTAAATACTGTTATCAACCTACTTGGCTTGGAGCCTTGTGAG GGCACAGAGGAGGTTCCACCCAATTCAAGATCACEST: gi|10254273|gb|BE822039.1|BE822039
genomic: CTGAAGCTGTAAATACTGTTATCAACCTACTTGGCTTGGAGCCTTGTGAGgtaagctgat ... ttgtgtgcagGGCACAGAGGAGGTTCCACCCAATTCAAGATCAC
EST: CTGAAGCTGTAAATACTGTTATCAACCTACTTGGCTTGGAGCCTTGTGAG GGCACAGAGGAGGTTCCACCCAATTCAAGATCACACACATGCTTATTGTCGEST: gi|6455399|gb|AW186082.1|AW186082
genomic: CTGAAGCTGTAAATACTGTTATCAACCTACTTGGCTTGGAGCCTTGTGAGgtaagctgat ... ttgtgtgcagGGCACAGAGGAGGTTCCACCCAATTCAAGATCACACACATGCTTATTGTCG
EST: CTGAAGCTGTAAATACTGTTATCAACCTACTTGGCTTGGAGCCTTGTGAG GGCACAGAGGAGGTTCCACCCAATTCAAGATCACACACATGCTTATTGTCGEST: gi|193537873|gb|FK494166.1|FK494166
genomic: CTGAAGCTGTAAATACTGTTATCAACCTACTTGGCTTGGAGCCTTGTGAGgtaagctgat ... ttgtgtgcagGGCACAGAGGAGGTTCCACCCAATTCAAGATCACACACATGCTTATTGTCG
EST: CTGAAGCTGTAAATACTGTTATCAACCTACTTGGCTTGGAGCCTTGTGAG GGCACAGAGGAGGTTCCACCCAATTCAAGATCACACACATGCTTATTGTCGEST: gi|10236184|gb|BE805072.1|BE805072
genomic: CTGAAGCTGTAAATACTGTTATCAACCTACTTGGCTTGGAGCCTTGTGAGgtaagctgat ... ttgtgtgcagGGCACAGAGGAGGTTCCACCCAATTCAAGATCACACACATGCTTATTGTCG
EST: TATCAACCTACTTGGCTTGGAGCCTTGTGAG GGCACAGAGGATGTTCCACCCAATTCAAGATCACACACATGCTTATTGTCGEST: gi|151393638|gb|EV263513.1|EV263513
genomic: TATCAACCTACTTGGCTTGGAGCCTTGTGAGgtaagctgat ... ttgtgtgcagGGCACAGAGGAGGTTCCACCCAATTCAAGATCACACACATGCTTATTGTCG
EST: CTGAAGCTGTAAATACTGTTATCAACCTACTTGGCTTGGAGCCTTGTGAG GGCACAGAGGAGGTTCCACCCAATTCAAGATCACACACATGCTTATTGTCG
genomic: CTGAAGCTGTAAATACTGTTATCAACCTACTTGGCTTGGAGCCTTGTGAGgtaagctgat ... ttgtgtgcagGGCACAGAGGAGGTTCCACCCAATTCAAGATCACACACATGCTTATTGTCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGATTTTGAGCGTGTGGATGAGTATGGTCTTGGTCCTAGAGAGAGTTTGGCTGAAGCTGTAAATACTGTTATCAACCTACTTGGCTTGGAGCCTTGTGAGgtaagctgatgatgtcaattgctgctttgataaactctcttttgagatcattttatttaacttgtatattgcacgtgttgcgtacaaaggttgcacaaag
- - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG