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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAAAGAGTTGGTCAACTTTCAGCCAGAGAAAGGGGCAATTCTTGCGAATGCAACACCTGTAGGAATGCATCCCAATACAGACAGAATTCCTGTGGCAGAGgttctacaccctttattcaagtaaaataagtacaaaatttggatctagttcttcggatatttttaatgttgttctctatttaaaattgaagtatcatctt...

Basic information

species Glycine max
transcript GLYMA03G40240.1
intron # 17
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA03G40240.1 (Glycine max), 5'ss of exon 17
lower sequence: Vv14s0030g00670.t01 (Vitis vinifera), 5'ss of exon 8
CAAAGAGTTGGTCAACTTTCAGCCAGAGAAAGGGGCAATTCTTGCGAATGCAACACCTGTAGGAATGCATCCCAATACAGACAGAATTCCTGTGGCAGAGgttctacaccctttattcaagtaaaataagtacaaaatt-tggatctagttcttcggatatttttaatgttgttctctatttaaaattgaagtatcatctt
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TGAAGATGTGGCCAACTTCCAGCCTGAGAAAGGGGCAATCCTTGCAAACGCAACACCTGTAGGAATGCATCCAAATACAGATCGAATTCCTGTGGCTGAGgttct---ctcttcttccatccagactaggaccatatttctcaatctggctttc-----atgctcaagatcatt---tgtttgcatttcag----------