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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatgagccttttctttgctgtgtgtaggctataagagattgtgttgaaggagtagcttctttctcaaaactaatacatatttgcag

Basic information

species Glycine max
transcript GLYMA03G24630.1
intron # 17
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207681318|gb|GD663857.1|GD663857
EST:     TTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: TTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|208206859|gb|GE002552.1|GE002552
EST:     TGAGTGAAGAGGAGGTACTCAAAGGAATTTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: TGAGTGAAGAGGAGGTACTCAAAGGAATT-ATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|193663498|gb|FK604118.1|FK604118
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGA-GCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|193708846|gb|FK644580.1|FK644580
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGA-GCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|193414412|gb|FK377426.1|FK377426
EST:     TTGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTAATAAAAGAAGCAG
genomic: T-GAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTA-TAAAAGAAGCAG
EST: gi|193573139|gb|FK531444.1|FK531444
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTNAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|58018827|gb|CX705569.1|CX705569
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|193342785|gb|FK309061.1|FK309061
EST:     GAGTGAAGAGGGAGGTACTCAAAGGAATTATTTTCCCTTCGAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTA
genomic: GAGTGAAGAGG-AGGTACTCAAAGGAATTATTTTCCCTTC-AACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTA
EST: gi|193365950|gb|FK333311.1|FK333311
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTA
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTA
EST: gi|193658508|gb|FK604173.1|FK604173
EST:     TGAGTGAAGAGGAGGTACTCAAAGGAATTTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGA-GCAGT
genomic: TGAGTGAAGAGGAGGTACTCAAAGGAATT-ATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|193597454|gb|FK551898.1|FK551898
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|208251420|gb|GE049703.1|GE049703
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAG
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAG
EST: gi|58015662|gb|CX702404.1|CX702404
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|193667463|gb|FK613537.1|FK613537
EST:     TGAGTGAAGAGGAGGTACTCAAAGGAATTTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGA-GCAGT
genomic: TGAGTGAAGAGGAGGTACTCAAAGGAATT-ATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|193686524|gb|FK626883.1|FK626883
EST:     TGAGTGAAGAGGAGGTAACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGA-GCAGT
genomic: TGAGTGAAGAGGAGGTA-CTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|193396567|gb|FK363707.1|FK363707
EST:     AGTGAAGAGGAGGTACTCAAAGGAATTTATTTTCCCTTCTAACTATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAG
genomic: AGTGAAGAGGAGGTACTCAAAGGAATT-ATTTTCCCTTC-AAC-ATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAG
EST: gi|208302057|gb|GE100813.1|GE100813
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|207810142|gb|GD780916.1|GD780916
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCGGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|208301920|gb|GE099486.1|GE099486
EST:     AGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: AGTGAAGAGGAGGTACTCAAAGGAATTATTTT-CCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|208310674|gb|GE106020.1|GE106020
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACGGCTGTTATAAAAG
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAG
EST: gi|208206252|gb|GE005389.1|GE005389
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|208097053|gb|GD896778.1|GD896778
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|193315791|gb|FK280303.1|FK280303
EST:     CCCTTCAACATCCAG                         AATTCGAGATTATTACAAAGCAGGTAGCCACAGCTGTTATA
genomic: CCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGA-TATTACAAAGCAGGTAGCCACAGCTGTTATA
EST: gi|193549837|gb|FK507532.1|FK507532
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTANAAAAGA-GCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|13240420|gb|BG359729.1|BG359729
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|207820411|gb|GD792865.1|GD792865
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTGTTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|207830299|gb|GD803279.1|GD803279
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAAGCAG
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAA-GCAG
EST: gi|208318983|gb|GE112024.1|GE112024
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|208286024|gb|GE081616.1|GE081616
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|17401415|gb|BM178197.1|BM178197
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|193389779|gb|FK355868.1|FK355868
EST:     GAGTGAAGAGGAGGTACTCAAAAGGAATTTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTT
genomic: GAGTGAAGAGGAGGTACTCAAA-GGAATT-ATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTT
EST: gi|208119623|gb|GD917430.1|GD917430
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTT
EST: gi|193635258|gb|FK578901.1|FK578901
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTA-TTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|193675913|gb|FK617799.1|FK617799
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAAGGTAGCCACAGCTGTTATAAAAGA-GCAG
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCA-GGTAGCCACAGCTGTTATAAAAGAAGCAG
EST: gi|207796824|gb|GD768886.1|GD768886
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTA
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTA
EST: gi|207781083|gb|GD754768.1|GD754768
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|193542011|gb|FK496165.1|FK496165
EST:     TGAGTGAAGAGGAGGTACTCAAAGGAATTTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: TGAGTGAAGAGGAGGTACTCAAAGGAATT-ATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|207819146|gb|GD789850.1|GD789850
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|193573223|gb|FK531486.1|FK531486
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTNAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGA-GCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|208121146|gb|GD920297.1|GD920297
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAG
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAG
EST: gi|208263275|gb|GE064795.1|GE064795
EST:     TGAGTGAAGAGGAGGTACTCAAAGGAATTTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTAATAAAAGAAGCAG
genomic: TGAGTGAAGAGGAGGTACTCAAAGGAATT-ATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTA-TAAAAGAAGCAG
EST: gi|193315482|gb|FK279308.1|FK279308
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCT
EST: gi|192325221|gb|FK017562.1|FK017562
EST:     ATGAGTGAAGAGGAGGTACTCCAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|207819242|gb|GD789946.1|GD789946
EST:     ATGAGTGAAGAGGAGGTACCCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAAAGAAGCAGT
EST: gi|193468938|gb|FK431490.1|FK431490
EST:     ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAG                         AATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAA
genomic: ATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatga ... atatttgcagAATTCGAGATATTACAAAGCAGGTAGCCACAGCTGTTATAAA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TCTGGCTACATACATGAGTGAAGAGGAGGTACTCAAAGGAATTATTTTCCCTTCAACATCCAGgtataaatgagccttttctttgctgtgtgtaggctataagagattgtgttgaaggagtagcttctttctcaaaactaatacatatttgcag

- - - - - - - - - TGAAGA
- - - - - - - - - - AAGAGG
- - - - - - - - - -  AGAGGA
- - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - -  AAGGAA