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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTTCCTTTAGTAGATGAGAGACTAGTTCTTCTTGGTTACTGTGCATTTTCAGgtataactaccttttcttttttcccagtgaagcaaaatattcttaaagagaaagaaacaagtacattagaatacttaatactatgtctttcttttactttaacaatttagtttctatgaacacag

Basic information

species Glycine max
transcript GLYMA02G14210.1
intron # 17
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7028778|gb|AW458561.1|AW458561
EST:     TCCTTTAGTAGATGAGAGACTAGTTCTTCTTGGTTACTGTGCATTTTCAG                         TGACACTATACTTGCATTTTGCGACATCAGTCATTCATGAAATTACCAATG
genomic: TCCTTTAGTAGATGAGAGACTAGTTCTTCTTGGTTACTGTGCATTTTCAGgtataactac ... atgaacacagTGACACTATACTTGCATTTTGCGACATCAGTCATTCATGAAATTACCAATG
EST: gi|15286735|gb|BI470626.1|BI470626
EST:     TCCTTTAGTAGATGAGAGACTAGTTCTTCTTGGTTACTGTGCATTTTCAG                         TGACACTATACTTGCATTTTGCGACATCAGTCATTCATGAAATTACCAATG
genomic: TCCTTTAGTAGATGAGAGACTAGTTCTTCTTGGTTACTGTGCATTTTCAGgtataactac ... atgaacacagTGACACTATACTTGCATTTTGCGACATCAGTCATTCATGAAATTACCAATG
EST: gi|10252639|gb|BE820405.1|BE820405
EST:     TCCTTTAGTAGATGAGAGACTAGTTCTTCTTGGTTACTGTGCATTTTCAG                         TGACACTATACTTGCATTTTGCGACATCAGTCATTCATGAAATTACCAATG
genomic: TCCTTTAGTAGATGAGAGACTAGTTCTTCTTGGTTACTGTGCATTTTCAGgtataactac ... atgaacacagTGACACTATACTTGCATTTTGCGACATCAGTCATTCATGAAATTACCAATG
EST: gi|16995635|gb|BM085007.1|BM085007
EST:     TCCTTTAGTAGATGAGAGACTAGTTCTTCTTGGTTACTGTGCATTTTCAG                         TGACACTATACTTGCATTTTGCGACATCAGTCATTCATGAAATTACCAATG
genomic: TCCTTTAGTAGATGAGAGACTAGTTCTTCTTGGTTACTGTGCATTTTCAGgtataactac ... atgaacacagTGACACTATACTTGCATTTTGCGACATCAGTCATTCATGAAATTACCAATG