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ATAAAGGGCCTTGCTGGCAGCATAGCGACAATGGGAAATTGGCTGATTTCGTGGGTGATCACGATGACCGCTAACTTACTTTTGAATTGGAACAGTGGAGgtgagcgtgtgtatagttcatgtcttgtatccttgtcaatataatgctgacttgtctgtctacag
species | Glycine max |
transcript | GLYMA02G06280.1 |
intron # | 17 |
splice site | 5' |
intron type | U2 |
EST: GTGGGTGATCACGATGACCGCTAACTTACTTTTGAATTGGAACAGTGGAG GGACATTTACAATCTACACAGTGGTAGCTGCCTTTACTATTGCTTTTATAGEST: gi|214004822|gb|DB988831.1|DB988831
genomic: GTGGGTGATCACGATGACCGCTAACTTACTTTTGAATTGGAACAGTGGAGgtgagcgtgt ... ctgtctacagGGACATTTACAATCTACACAGTGGTAGCTGCCTTTACTATTGCTTTTATAG
EST: TAGAG-GATCACGATGACCGCTAACTTACTTTTGAATTGGAACAGTGGAG GGACATTTACAATCTACACAGTGGTAGCTGCCTTTACTATTGCTTTTATAGEST: gi|213611333|gb|DB983953.1|DB983953
genomic: T-GGGTGATCACGATGACCGCTAACTTACTTTTGAATTGGAACAGTGGAGgtgagcgtgt ... ctgtctacagGGACATTTACAATCTACACAGTGGTAGCTGCCTTTACTATTGCTTTTATAG
EST: GTGGGTGATCACGATGACCGCTAACTTACTTTTGAATTGGAACAGTGGAG GGACATTTACAATCTACACAGTGGTAGCTGCCTTTACTATTGCTTTTATAGEST: gi|192311159|gb|FK004792.1|FK004792
genomic: GTGGGTGATCACGATGACCGCTAACTTACTTTTGAATTGGAACAGTGGAGgtgagcgtgt ... ctgtctacagGGACATTTACAATCTACACAGTGGTAGCTGCCTTTACTATTGCTTTTATAG
EST: GTGGGTGATCACGATGACCGCTAACTTACTTTTGAATTGGAACAGTGGAG GGACATTTACAATCTACACAGTGGTAGCTGCCTTTACTATTGCTTTTATAG
genomic: GTGGGTGATCACGATGACCGCTAACTTACTTTTGAATTGGAACAGTGGAGgtgagcgtgt ... ctgtctacagGGACATTTACAATCTACACAGTGGTAGCTGCCTTTACTATTGCTTTTATAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAAAGGGCCTTGCTGGCAGCATAGCGACAATGGGAAATTGGCTGATTTCGTGGGTGATCACGATGACCGCTAACTTACTTTTGAATTGGAACAGTGGAGgtgagcgtgtgtatagttcatgtcttgtatccttgtcaatataatgctgacttgtctgtctacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG