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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTCCAACATACAAACGTCCAGGCACTTTGAGAGCAAAGCTTCTATATGCCATCAGTTCAAATGCCGGATTTGAACTTTCTTGATCTGCTTCAGgtggtcagtattcttatgttgtataatataatgaattggtgccaacttctgttgcatctactttgataaattgtgctctgcaagattagggcatgtttct...

Basic information

species Glycine max
transcript GLYMA19G37310.3
intron # 16
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151407290|gb|EV277105.1|EV277105
EST:     ATATGCCATCAGTTCAAATGCCGGATTTGAACTTTCTTGATCTGCTTCAG                         G--
genomic: ATATGCCATCAGTTCAAATGCCGGATTTGAACTTTCTTGATCTGCTTCAGgtggtcagta ... aatgccgcagGTG
EST: gi|207688927|gb|GD672272.1|GD672272
EST:     ATATGCCATCAGTTCAAATGCCGGATTTGAACTTTCTTGATCTGCTTCAG                         GTG
genomic: ATATGCCATCAGTTCAAATGCCGGATTTGAACTTTCTTGATCTGCTTCAGgtggtcagta ... aatgccgcagGTG
EST: gi|37995513|gb|CF807102.1|CF807102
EST:     ATATGCCATCAGTTCAAATGCCGGATTTGAACTTTCTTGATCTGCTTCAA                         GTG
genomic: ATATGCCATCAGTTCAAATGCCGGATTTGAACTTTCTTGATCTGCTTCAGgtggtcagta ... aatgccgcagGTG