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TCTAAGTACATCACTTCAAGCACCTTCCTCAAATTCACTTGTTGCATCAGCAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGgtaagtaacagacaattttgcatcagttacacatatttctgtatttttttaaaattgagaatcagttctatttccctagttatagttaatggcatcaagt...
species | Glycine max |
transcript | GLYMA19G30450.1 |
intron # | 16 |
splice site | 5' |
intron type | U2 |
EST: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAG GTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGAEST: gi|23733336|gb|BU764862.1|BU764862
genomic: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGgtaagtaaca ... acttttgcagGTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGA
EST: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAG GTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGAEST: gi|14125862|gb|BG790300.1|BG790300
genomic: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGgtaagtaaca ... acttttgcagGTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGA
EST: CAATTACATTTCAAAATTCTGTAGATGGGAAAAATTACATACGAATAAAG GTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGAEST: gi|23725399|gb|BU760653.1|BU760653
genomic: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGgtaagtaaca ... acttttgcagGTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGA
EST: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAG GTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGAEST: gi|6227863|gb|AW156462.1|AW156462
genomic: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGgtaagtaaca ... acttttgcagGTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGA
EST: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAG GTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGAEST: gi|207699637|gb|GD678922.1|GD678922
genomic: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGgtaagtaaca ... acttttgcagGTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGA
EST: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAG GTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGACGGAEST: gi|10253908|gb|BE821723.1|BE821723
genomic: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGgtaagtaaca ... acttttgcagGTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGA
EST: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAG GTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGAEST: gi|15285857|gb|BI469748.1|BI469748
genomic: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGgtaagtaaca ... acttttgcagGTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGA
EST: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAG GTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGAEST: gi|13312086|gb|BG405737.1|BG405737
genomic: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGgtaagtaaca ... acttttgcagGTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGA
EST: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAG GTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGAEST: gi|22523685|gb|BU082496.1|BU082496
genomic: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGgtaagtaaca ... acttttgcagGTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGA
EST: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAG GTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGACGGAEST: gi|14125033|gb|BG789471.1|BG789471
genomic: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGgtaagtaaca ... acttttgcagGTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGA
EST: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAG GTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGAEST: gi|48575529|gb|CO036449.1|CO036449
genomic: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGgtaagtaaca ... acttttgcagGTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGA
EST: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAG GTTGTGAACTTCGGTACEST: gi|21888837|gb|BQ742050.1|BQ742050
genomic: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGgtaagtaaca ... acttttgcagGTTGTGAACTTCGGTAC
EST: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAG GTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGAEST: gi|207690765|gb|GD672501.1|GD672501
genomic: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGgtaagtaaca ... acttttgcagGTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGA
EST: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAG GTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGACGGAEST: gi|208156031|gb|GD954535.1|GD954535
genomic: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGgtaagtaaca ... acttttgcagGTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGA
EST: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAG GTTGTGAACTTCGGTACCACTAGACCGTGAACCTCAAAATEST: gi|15285949|gb|BI469840.1|BI469840
genomic: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGgtaagtaaca ... acttttgcagGTTGTGAACTTCGGTACCACT-G-CCGTGAACCTCAAAAT
EST: CAATTACATTTCAAAATTCTGTAGATAAGAATTTTTACATACGAATAAAG GTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGA
genomic: CAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGgtaagtaaca ... acttttgcagGTTGTGAACTTCGGTACCACTGCCGTGAACCTCAAAATCTCTCTTGATGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTAAGTACATCACTTCAAGCACCTTCCTCAAATTCACTTGTTGCATCAGCAATTACATTTCAAAATTCTGTAGATAAGAAAAATTACATACGAATAAAGgtaagtaacagacaattttgcatcagttacacatatttctgtatttttttaaaattgagaatcagttctatttccctagttatagttaatggcatcaagt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA