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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACTGGTGGTAACAATGGTGATGCTTCCACTCAAAATGGGTTGAATTCTAGACATCAAATCCCAACCAGAGAAGGTGCCACGAATACTTTGGATGATACTGgtttgttgctctctgaccttgctgaaatgttccttattttttagtggaagttactcttgttggaaactagtttttatttcatggcagtgtgcagttgagt...

Basic information

species Glycine max
transcript GLYMA12G07590.1
intron # 16
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208290053|gb|GE087115.1|GE087115
EST:     ACATCAAATCCCAACCAGAGAAGGTGCCACGAATACTTTGGATGATACTG                         CTTCTTTACTCCTTGGGATGAATGATGTTAGATCTGACAGGGCAAGAAGGC
genomic: ACATCAAATCCCAACCAGAGAAGGTGCCACGAATACTTTGGATGATACTGgtttgttgct ... ctttatgcagCTTCTTTACTCCTTGGGATGAATGATGTTAGATCTGACAGGGCAAGAAGGC
EST: gi|254334594|gb|GR844379.1|GR844379
EST:     AATACTTTGGATGATACTG                         CTTCTTTACTCCTTGGGATGAATGATGTTAGATCTGACAGGGCAAGAAGGC
genomic: AATACTTTGGATGATACTGgtttgttgct ... ctttatgcagCTTCTTTACTCCTTGGGATGAATGATGTTAGATCTGACAGGGCAAGAAGGC
EST: gi|16348338|gb|BI973933.1|BI973933
EST:     ACATCAAATCCCAACCAGAGAAGGTGCCACGAATACTTTGGATGATACTG                         CTTCTTTACTCCTTGGGATGAATGATGTTAGATCTGACAGGGCAAGAAGGC
genomic: ACATCAAATCCCAACCAGAGAAGGTGCCACGAATACTTTGGATGATACTGgtttgttgct ... ctttatgcagCTTCTTTACTCCTTGGGATGAATGATGTTAGATCTGACAGGGCAAGAAGGC
EST: gi|16995876|gb|BM085248.1|BM085248
EST:     ACATCAAATCCCAACCAGAGAAGGTGCCACGAATACTTTGGATGATACTG                         CTTCTTTACTCCTTGGGATGAATGATGTTAGATCTGACAGGGCAAGAAGGC
genomic: ACATCAAATCCCAACCAGAGAAGGTGCCACGAATACTTTGGATGATACTGgtttgttgct ... ctttatgcagCTTCTTTACTCCTTGGGATGAATGATGTTAGATCTGACAGGGCAAGAAGGC
EST: gi|10234250|gb|BE803138.1|BE803138
EST:     ACATCAAATCCCAACCAGAGAAGGTGCCACGAATACTTTGGATGATACTG                         CTTCTTTACTCCTTGGGATGAATGATGTTAGATCTGACAGGGCAAGAAGGC
genomic: ACATCAAATCCCAACCAGAGAAGGTGCCACGAATACTTTGGATGATACTGgtttgttgct ... ctttatgcagCTTCTTTACTCCTTGGGATGAATGATGTTAGATCTGACAGGGCAAGAAGGC
EST: gi|19346695|gb|BM891575.1|BM891575
EST:     ACATCAAATCCCAACCAGAGAAGGTGCCACGAATACTTTGGATGATACTG                         CTTCTTTACTCCTTGGGATGAATGATGTTAGATCTGACAGGGCAAGAAGGC
genomic: ACATCAAATCCCAACCAGAGAAGGTGCCACGAATACTTTGGATGATACTGgtttgttgct ... ctttatgcagCTTCTTTACTCCTTGGGATGAATGATGTTAGATCTGACAGGGCAAGAAGGC